RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 CTAGE5O15320 804 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 ALAS1P13196 640 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 CYP2C18P33260 490 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 FSCN1Q16658 493 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 PPM1EQ8WY54 764 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 SEZ6LQ9BYH1 1024 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 GNEQ9Y223 722 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 ASTN1O14525 1302 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 SOWAHBA6NEL2 793 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 PLA2G6O60733 806 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 FGBP02675 491 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 MCCP23508 829 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 ITGA7Q13683 1181 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 SLC43A3Q8NBI5 491 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 GBF1Q92538 1859 aa16.29■□□□□ 0.2
SMARCD3-211ENST00000485592 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
SMARCD3-211ENST00000485592 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
SMARCD3-211ENST00000485592 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
SMARCD3-211ENST00000485592 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
SMARCD3-211ENST00000485592 Q9Y3F1 56 aa16.28■□□□□ 0.2
SMARCD3-211ENST00000485592 VCANP13611 3396 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 TNFRSF10AO00220 468 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 SMPD1P17405 629 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 ZMYM1Q5SVZ6 1142 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 NSMFQ6X4W1 530 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 FBXO16Q8IX29 292 aaPredicted RBP16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 SLC28A3Q9HAS3 691 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 VTA1Q9NP79 307 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 CYP39A1Q9NYL5 469 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
SMARCD3-211ENST00000485592 UMODL1Q5DID0 1318 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 LCTP09848 1927 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 B4GALT4O60513 344 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 IGFBP4P22692 258 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 CCL23P55773 120 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 MUM1L1Q5H9M0 696 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 OTOP2Q7RTS6 562 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 NKX2-4Q9H2Z4 354 aa16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 CXXC1Q9P0U4 656 aaPredicted RBP16.26■□□□□ 0.19
SMARCD3-211ENST00000485592 SNAP25P60880 206 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 TAPT1Q6NXT6 567 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 RPUSD2Q8IZ73 545 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 IL27Q8NEV9 243 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCD3-211ENST00000485592 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 ICAM1P05362 532 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 PSMC6P62333 389 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 IL17RBQ9NRM6 502 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 ADD3Q9UEY8 706 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 SPTBN5Q9NRC6 3674 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-211ENST00000485592 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 NMT2O60551 498 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 SUPT20HL2P0C7V6 817 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 MX1P20591 662 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 PTGS1P23219 599 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 CCDC85BQ15834 202 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 DUSP28Q4G0W2 176 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 PPP2R2DQ66LE6 453 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 MORC4Q8TE76 937 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 ASB2Q96Q27 587 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 WNT8AQ9H1J5 351 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 RANBP17Q9H2T7 1088 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 YBX2Q9Y2T7 364 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-211ENST00000485592 PFKMP08237 780 aa16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 CPT1AP50416 773 aa16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 ALDH5A1P51649 535 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 MRPS5P82675 430 aaKnown RBP16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 ADGRE1Q14246 886 aa16.22■□□□□ 0.19
SMARCD3-211ENST00000485592 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms