RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 INHAP05111 366 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 ELNP15502 786 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 BMP8BP34820 402 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 STAT3P40763 770 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 RCAN1P53805 252 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 ST3GAL1Q11201 340 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 RTN1Q16799 776 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 CPXCR1Q8N123 301 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 NECAB1Q8N987 351 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
TRA2B-213ENST00000485530 PIGSQ96S52 555 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
TRA2B-213ENST00000485530 STXBP5LQ9Y2K9 1186 aa14.22□□□□□ -0.13
TRA2B-213ENST00000485530 PARP14Q460N5 1801 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 PFKFB2O60825 505 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 TFRCP02786 760 aaKnown RBP14.21□□□□□ -0.13
TRA2B-213ENST00000485530 SMARCA1P28370 1054 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 KIF5BP33176 963 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRA2B-213ENST00000485530 SCRN1Q12765 414 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 MB21D1Q8N884 522 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.13
TRA2B-213ENST00000485530 COL25A1Q9BXS0 654 aaPredicted RBP14.21□□□□□ -0.13
TRA2B-213ENST00000485530 NID2Q14112 1375 aa14.21□□□□□ -0.14
TRA2B-213ENST00000485530 VCANP13611 3396 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
TRA2B-213ENST00000485530 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 CAPN2P17655 700 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 FLT3LGP49771 235 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 PLS1Q14651 629 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 PXYLP1Q8TE99 480 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 DIS3LQ8TF46 1054 aaKnown RBP14.2□□□□□ -0.14
TRA2B-213ENST00000485530 GTF3C2Q8WUA4 911 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-213ENST00000485530 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
TRA2B-213ENST00000485530 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 MTMR10Q9NXD2 777 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 LIMCH1Q9UPQ0 1083 aa14.2□□□□□ -0.14
TRA2B-213ENST00000485530 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-213ENST00000485530 ICAM1P05362 532 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 FDX1P10109 184 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 ERCC3P19447 782 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 GNAQP50148 359 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 OAZ1P54368 228 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 IRF5Q13568 498 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
TRA2B-213ENST00000485530 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 MUM1L1Q5H9M0 696 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
TRA2B-213ENST00000485530 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 CLEC4DQ8WXI8 215 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 LZTS2Q9BRK4 669 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
TRA2B-213ENST00000485530 GJD2Q9UKL4 321 aa14.19□□□□□ -0.14
TRA2B-213ENST00000485530 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
TRA2B-213ENST00000485530 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 PNMA6FA0A0J9YX94 578 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 ZBTB5O15062 677 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 PPP2R5BQ15173 497 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 PKN1Q16512 942 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 NECAB2Q7Z6G3 386 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 PHKBQ93100 1093 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
TRA2B-213ENST00000485530 A0A0G2JMZ2 1700 aa14.18□□□□□ -0.14
TRA2B-213ENST00000485530 SMCHD1A6NHR9 2005 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 OPLAHO14841 1288 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
TRA2B-213ENST00000485530 ALAS1P13196 640 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 IFNAR1P17181 557 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 GPR142Q7Z601 462 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 NCAPG2Q86XI2 1143 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 USP6NLQ92738 828 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 COA7Q96BR5 231 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
TRA2B-213ENST00000485530 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
TRA2B-213ENST00000485530 COL11A1P12107 1806 aaPredicted RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 NFIBO00712 420 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 PRPF3O43395 683 aaKnown RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 SLC25A27O95847 323 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 PTPREP23469 700 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
TRA2B-213ENST00000485530 USH1GQ495M9 461 aa14.16□□□□□ -0.14
TRA2B-213ENST00000485530 MORN1Q5T089 497 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms