RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 LAMA2P24043 3122 aaKnown RBP30.27■■■□□ 2.44
HLA-F-227ENST00000485513 FRMPD2Q68DX3 1309 aaPredicted RBP30.26■■■□□ 2.44
HLA-F-227ENST00000485513 KIAA0355O15063 1070 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 NSMFQ6X4W1 530 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 ANKRD33Q7Z3H0 272 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 GLT1D1Q96MS3 346 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 TTC14Q96N46 770 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 TOX2Q96NM4 488 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 GPCPD1Q9NPB8 672 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 DIAPH3Q9NSV4 1193 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 COL6A3P12111 3177 aa30.26■■■□□ 2.43
HLA-F-227ENST00000485513 DCDC2CA8MYV0 355 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 ASGR1P07306 291 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 RAG1P15918 1043 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 ITGB8P26012 769 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 GNASQ5JWF2 1037 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 C9orf50Q5SZB4 431 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 CWC27Q6UX04 472 aaKnown RBP30.25■■■□□ 2.43
HLA-F-227ENST00000485513 TMEM39AQ9NV64 488 aa30.25■■■□□ 2.43
HLA-F-227ENST00000485513 ASTN1O14525 1302 aa30.24■■■□□ 2.43
HLA-F-227ENST00000485513 ELP1O95163 1332 aa30.24■■■□□ 2.43
HLA-F-227ENST00000485513 PDHBP11177 359 aa30.24■■■□□ 2.43
HLA-F-227ENST00000485513 TNFAIP2Q03169 654 aa30.24■■■□□ 2.43
HLA-F-227ENST00000485513 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.23■■■□□ 2.43
HLA-F-227ENST00000485513 ZNF213O14771 459 aa30.23■■■□□ 2.43
HLA-F-227ENST00000485513 FAAP100Q0VG06 881 aa30.23■■■□□ 2.43
HLA-F-227ENST00000485513 NOL8Q76FK4 1167 aaKnown RBP30.23■■■□□ 2.43
HLA-F-227ENST00000485513 ESR2Q92731 530 aa30.23■■■□□ 2.43
HLA-F-227ENST00000485513 VTI1AQ96AJ9 217 aa30.23■■■□□ 2.43
HLA-F-227ENST00000485513 NEDD4P46934 1319 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 LRRC37A2A6NM11 1700 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 HIP1O00291 1037 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 FAM109BQ6ICB4 259 aaPredicted RBP30.22■■■□□ 2.43
HLA-F-227ENST00000485513 DDX49Q9Y6V7 483 aaKnown RBP30.22■■■□□ 2.43
HLA-F-227ENST00000485513 LCTP09848 1927 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 LAMA4Q16363 1823 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 MROH7Q68CQ1 1323 aa30.22■■■□□ 2.43
HLA-F-227ENST00000485513 NKX3-2P78367 333 aa30.21■■■□□ 2.43
HLA-F-227ENST00000485513 ZNF543Q08ER8 600 aa30.21■■■□□ 2.43
HLA-F-227ENST00000485513 STXBP5LQ9Y2K9 1186 aa30.21■■■□□ 2.43
HLA-F-227ENST00000485513 CTAGE5O15320 804 aa30.2■■■□□ 2.43
HLA-F-227ENST00000485513 BAATQ14032 418 aaPredicted RBP30.2■■■□□ 2.43
HLA-F-227ENST00000485513 SLC17A8Q8NDX2 589 aa30.2■■■□□ 2.43
HLA-F-227ENST00000485513 GNEQ9Y223 722 aaKnown RBP30.2■■■□□ 2.43
HLA-F-227ENST00000485513 A0A0U1RQG5 324 aaPredicted RBP30.19■■■□□ 2.42
HLA-F-227ENST00000485513 SNHG28P0DPA3 235 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 NT5C2P49902 561 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 CDK7P50613 346 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 BEX3Q00994 111 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 EEPD1Q7L9B9 569 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 TLK2Q86UE8 772 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 FBXO16Q8IX29 292 aaPredicted RBP30.19■■■□□ 2.42
HLA-F-227ENST00000485513 PURBQ96QR8 312 aaKnown RBP30.19■■■□□ 2.42
HLA-F-227ENST00000485513 ZKSCAN3Q9BRR0 538 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 PNMA2Q9UL42 364 aa30.19■■■□□ 2.42
HLA-F-227ENST00000485513 NFIBO00712 420 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 FPGSQ05932 587 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 IQSEC1Q6DN90 963 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 DGKHQ86XP1 1220 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 MORC4Q8TE76 937 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 AP5M1Q9H0R1 490 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 PDGFCQ9NRA1 345 aa30.18■■■□□ 2.42
HLA-F-227ENST00000485513 ADD3Q9UEY8 706 aaKnown RBP30.18■■■□□ 2.42
HLA-F-227ENST00000485513 ARVCFO00192 962 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 SMPD1P17405 629 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 EPHB4P54760 987 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 TAPT1Q6NXT6 567 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 DSCC1Q9BVC3 393 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 VTA1Q9NP79 307 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 TBX21Q9UL17 535 aa30.17■■■□□ 2.42
HLA-F-227ENST00000485513 PTPDC1A2A3K4 754 aa30.16■■■□□ 2.42
HLA-F-227ENST00000485513 KDM4AO75164 1064 aa30.16■■■□□ 2.42
HLA-F-227ENST00000485513 CCDC178Q5BJE1 867 aa30.16■■■□□ 2.42
HLA-F-227ENST00000485513 GPATCH4Q5T3I0 446 aaKnown RBP30.16■■■□□ 2.42
HLA-F-227ENST00000485513 IQCA1Q86XH1 822 aa30.16■■■□□ 2.42
HLA-F-227ENST00000485513 DYNC1LI2O43237 492 aaPredicted RBP30.15■■■□□ 2.42
HLA-F-227ENST00000485513 TIMP1P01033 207 aa30.15■■■□□ 2.42
HLA-F-227ENST00000485513 ALDH5A1P51649 535 aaPredicted RBP30.15■■■□□ 2.42
HLA-F-227ENST00000485513 FSCN1Q16658 493 aaKnown RBP30.15■■■□□ 2.42
HLA-F-227ENST00000485513 ZNF697Q5TEC3 545 aa30.15■■■□□ 2.42
HLA-F-227ENST00000485513 CLEC4DQ8WXI8 215 aa30.15■■■□□ 2.42
HLA-F-227ENST00000485513 RNPC3Q96LT9 517 aaKnown RBP30.15■■■□□ 2.42
HLA-F-227ENST00000485513 SUPT16HQ9Y5B9 1047 aaKnown RBP30.15■■■□□ 2.42
HLA-F-227ENST00000485513 WDR19Q8NEZ3 1342 aa30.15■■■□□ 2.42
HLA-F-227ENST00000485513 LOC102724159A0A0B4J2E5 919 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 PTGS1P23219 599 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 SMAD3P84022 425 aaKnown RBP30.14■■■□□ 2.42
HLA-F-227ENST00000485513 PWP2Q15269 919 aaKnown RBP30.14■■■□□ 2.42
HLA-F-227ENST00000485513 IMMTQ16891 758 aaKnown RBP30.14■■■□□ 2.42
HLA-F-227ENST00000485513 CXCL17Q6UXB2 119 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 SLC30A10Q6XR72 485 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 KIAA1211Q6ZU35 1233 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 FAM161BQ96MY7 647 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 CTNNA3Q9UI47 895 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 Q9Y3F1 56 aa30.14■■■□□ 2.42
HLA-F-227ENST00000485513 B4E1Z4 1266 aa30.13■■■□□ 2.41
HLA-F-227ENST00000485513 TLR3O15455 904 aaKnown RBP30.13■■■□□ 2.41
HLA-F-227ENST00000485513 ZEB2O60315 1214 aa30.13■■■□□ 2.41
HLA-F-227ENST00000485513 CABYRO75952 493 aa30.13■■■□□ 2.41
HLA-F-227ENST00000485513 GOLGA8HP0CJ92 632 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms