RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 C1QTNF1Q9BXJ1 281 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 WNT8AQ9H1J5 351 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SLC38A10Q9HBR0 1119 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
HLA-DQB1-208ENST00000484729 ZBBXA8MT70 800 aa18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PSMC6P62333 389 aa18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 NKX3-2P78367 333 aa18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 VWCEQ96DN2 955 aa18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SCLYQ96I15 445 aa18.24■□□□□ 0.51
HLA-DQB1-208ENST00000484729 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 ERC2O15083 957 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 B4GALT4O60513 344 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PRDM1O75626 825 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 EPHX3Q9H6B9 360 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 CERS4Q9HA82 394 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 ZNF287Q9HBT7 754 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 FBXO40Q9UH90 709 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 ATP2A2P16615 1042 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 FSCN1Q16658 493 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 TMEM63BQ5T3F8 832 aa18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 KRT40Q6A162 431 aa18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 TLK2Q86UE8 772 aa18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 OTUD7AQ8TE49 926 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 GNEQ9Y223 722 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PRRC2BQ5JSZ5 2229 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 CABYRO75952 493 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SMPD1P17405 629 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 TTLL4Q14679 1199 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 AAK1Q2M2I8 961 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PI4K2BQ8TCG2 481 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 LRFN3Q9BTN0 628 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 NACAP1Q9BZK3 213 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 AP5M1Q9H0R1 490 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 MTCH2Q9Y6C9 303 aa18.21■□□□□ 0.51
HLA-DQB1-208ENST00000484729 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 EPOPA6NHQ4 379 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 CA3P07451 260 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 MX1P20591 662 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 EEPD1Q7L9B9 569 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 AGBL1Q96MI9 1066 aa18.2■□□□□ 0.5
HLA-DQB1-208ENST00000484729 OAZ1P54368 228 aa18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 DEFB128Q7Z7B8 93 aa18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 CEP95Q96GE4 821 aa18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 NAPBQ9H115 298 aa18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-208ENST00000484729 MYH4Q9Y623 1939 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 CYP2C9P11712 490 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PDE4BQ07343 736 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 MKL1Q969V6 931 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ALDH8A1Q9H2A2 487 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 RNF146Q9NTX7 359 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TRMT13Q9NUP7 481 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 MTMR4Q9NYA4 1195 aa18.18■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ASB14A6NK59 587 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TMEM232C9JQI7 657 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 GTPBP6O43824 516 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ZEB2O60315 1214 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ARHGEF15O94989 841 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TTLL1O95922 423 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 BMP3P12645 472 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SNAP25P60880 206 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PPARAQ07869 468 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 KHSRPQ92945 711 aaKnown RBP eCLIP18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ZNF536O15090 1300 aa18.17■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms