RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PDGFCQ9NRA1 345 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 ARIH1Q9Y4X5 557 aaPredicted RBP13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 MUC6Q6W4X9 2439 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 FAM86C2PA6NEL3 165 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 CABYRO75952 493 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 TMEM67Q5HYA8 995 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
SMARCC1-205ENST00000483847 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 CYP2C9P11712 490 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 OAZ1P54368 228 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 UBE3CQ15386 1083 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.02□□□□□ -0.332e-13■■□□□ 14.1
SMARCC1-205ENST00000483847 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 ALDH8A1Q9H2A2 487 aaPredicted RBP13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 TRMT13Q9NUP7 481 aaKnown RBP13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
SMARCC1-205ENST00000483847 ATP5JP18859 108 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 TAP1Q03518 808 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 TAPT1Q6NXT6 567 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 ARNTL2Q8WYA1 636 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 HAUS7Q99871 368 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 ACAD9Q9H845 621 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 CD320Q9NPF0 282 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 RNF146Q9NTX7 359 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 COL4A4P53420 1690 aaPredicted RBP13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 LCTP09848 1927 aa13.01□□□□□ -0.33
SMARCC1-205ENST00000483847 ZNF536O15090 1300 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 PRDM1O75626 825 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 SBK1Q52WX2 424 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 PANK1Q8TE04 598 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 PPP1R13LQ8WUF5 828 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 HLA-CQ95604 372 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 MKL1Q969V6 931 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 CHMP4CQ96CF2 233 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 CEP95Q96GE4 821 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
SMARCC1-205ENST00000483847 STRBPQ96SI9 672 aaKnown RBP13□□□□□ -0.33
SMARCC1-205ENST00000483847 COG6Q9Y2V7 657 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 BRWD1Q9NSI6 2320 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 PTPRSQ13332 1948 aa13□□□□□ -0.33
SMARCC1-205ENST00000483847 TNKSO95271 1327 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 ASB14A6NK59 587 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 ZEB2O60315 1214 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 LPXNO60711 386 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 GPR37L1O60883 481 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 SNAP25P60880 206 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 GRB10Q13322 594 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 IQSEC1Q6DN90 963 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 SIRT2Q8IXJ6 389 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 MTMR4Q9NYA4 1195 aa12.99□□□□□ -0.33
SMARCC1-205ENST00000483847 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 PFKMP08237 780 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 BMP3P12645 472 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 ALAS1P13196 640 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 MUM1L1Q5H9M0 696 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 SLFN13Q68D06 897 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
SMARCC1-205ENST00000483847 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 LCHNA4D1U4 455 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 TTLL1O95922 423 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 STAT2P52630 851 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 PURAQ00577 322 aaKnown RBP12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 KIAA1211Q6ZU35 1233 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 RASGRP2Q7LDG7 609 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 CYP39A1Q9NYL5 469 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 Q9Y3F1 56 aa12.97□□□□□ -0.33
SMARCC1-205ENST00000483847 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 MYL3P08590 195 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 IQCF3P0C7M6 154 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms