RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CYP39A1Q9NYL5 469 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 CCDC171Q6TFL3 1326 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 TOP1P11387 765 aaKnown RBP21.27■■□□□ 1
ATG4B-221ENST00000483778 CST5P28325 142 aaPredicted RBP21.27■■□□□ 1
ATG4B-221ENST00000483778 NUCB1Q02818 461 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 TKFCQ3LXA3 575 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 GNASQ5JWF2 1037 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 PPP4R3BQ5MIZ7 849 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 BTNL9Q6UXG8 535 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 DCAF4Q8WV16 495 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 CCPG1Q9ULG6 757 aa21.27■■□□□ 1
ATG4B-221ENST00000483778 MOXD2PA6NHM9 499 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 RAG1P15918 1043 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 TNFAIP2Q03169 654 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 AKNAD1Q5T1N1 836 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 FAM109BQ6ICB4 259 aaPredicted RBP21.26■□□□□ 0.99
ATG4B-221ENST00000483778 TAPT1Q6NXT6 567 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 NSMFQ6X4W1 530 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 EEPD1Q7L9B9 569 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 NUP133Q8WUM0 1156 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 TOX2Q96NM4 488 aa21.26■□□□□ 0.99
ATG4B-221ENST00000483778 RANBP17Q9H2T7 1088 aaKnown RBP21.26■□□□□ 0.99
ATG4B-221ENST00000483778 GNEQ9Y223 722 aaKnown RBP21.26■□□□□ 0.99
ATG4B-221ENST00000483778 NFIBO00712 420 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 ICAM1P05362 532 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 SMPD1P17405 629 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 SYDE2Q5VT97 1194 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 ZKSCAN3Q9BRR0 538 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 OSBPL3Q9H4L5 887 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 LAMA4Q16363 1823 aa21.25■□□□□ 0.99
ATG4B-221ENST00000483778 DCDC2CA8MYV0 355 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 PDHBP11177 359 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 BAATQ14032 418 aaPredicted RBP21.24■□□□□ 0.99
ATG4B-221ENST00000483778 MFSD6Q6ZSS7 791 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 TICAM2Q86XR7 235 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 CPVLQ9H3G5 476 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 TBX21Q9UL17 535 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 ELP1O95163 1332 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 NEDD4P46934 1319 aa21.24■□□□□ 0.99
ATG4B-221ENST00000483778 MYH6P13533 1939 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 MYO9BQ13459 2157 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 ASB14A6NK59 587 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 NKX3-2P78367 333 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
ATG4B-221ENST00000483778 NOL8Q76FK4 1167 aaKnown RBP21.23■□□□□ 0.99
ATG4B-221ENST00000483778 FBXO16Q8IX29 292 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-221ENST00000483778 PCSK9Q8NBP7 692 aaKnown RBP21.23■□□□□ 0.99
ATG4B-221ENST00000483778 CLEC4DQ8WXI8 215 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 GLT1D1Q96MS3 346 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 GRIN2DO15399 1336 aa21.23■□□□□ 0.99
ATG4B-221ENST00000483778 ARVCFO00192 962 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 DYNC1LI2O43237 492 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-221ENST00000483778 ZNF543Q08ER8 600 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 AAMPQ13685 434 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 CXCL17Q6UXB2 119 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 C16orf59Q7L2K0 433 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 IL25Q9H293 177 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 TTYH1Q9H313 450 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-221ENST00000483778 SEMA6BQ9H3T3 888 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 SPC25Q9HBM1 224 aa21.22■□□□□ 0.99
ATG4B-221ENST00000483778 TIMP1P01033 207 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 GOLGA8HP0CJ92 632 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 FPGSQ05932 587 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 FAM126BQ8IXS8 530 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 MORC4Q8TE76 937 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 TTC14Q96N46 770 aa21.21■□□□□ 0.99
ATG4B-221ENST00000483778 DLL1O00548 723 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 SNHG28P0DPA3 235 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 IQSEC1Q6DN90 963 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 SLC30A10Q6XR72 485 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 TLK2Q86UE8 772 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 RNPC3Q96LT9 517 aaKnown RBP21.2■□□□□ 0.98
ATG4B-221ENST00000483778 UBA5Q9GZZ9 404 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
ATG4B-221ENST00000483778 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-221ENST00000483778 CD4P01730 458 aa21.19■□□□□ 0.98
ATG4B-221ENST00000483778 SMAD3P84022 425 aaKnown RBP21.19■□□□□ 0.98
ATG4B-221ENST00000483778 FSCN1Q16658 493 aaKnown RBP21.19■□□□□ 0.98
ATG4B-221ENST00000483778 SLC43A3Q8NBI5 491 aa21.19■□□□□ 0.98
ATG4B-221ENST00000483778 CDX2Q99626 313 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-221ENST00000483778 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.19■□□□□ 0.985e-7■□□□□ 10.9
ATG4B-221ENST00000483778 UNC80Q8N2C7 3258 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 PTPDC1A2A3K4 754 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 B4E1Z4 1266 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 ZNF213O14771 459 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 KDM4AO75164 1064 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 PDE4AP27815 886 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 ALDH5A1P51649 535 aaPredicted RBP21.18■□□□□ 0.98
ATG4B-221ENST00000483778 PSMC6P62333 389 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 ZNF697Q5TEC3 545 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 KIAA1211Q6ZU35 1233 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 TBC1D5Q92609 795 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 PPP1R12CQ9BZL4 782 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 AP5M1Q9H0R1 490 aa21.18■□□□□ 0.98
ATG4B-221ENST00000483778 CUL9Q8IWT3 2517 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 PRUNE2Q8WUY3 3088 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms