RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 FOXP3Q9BZS1 431 aa10.68□□□□□ -0.7
MCF2-207ENST00000483690 SLC52A2Q9HAB3 445 aa10.68□□□□□ -0.7
MCF2-207ENST00000483690 SEMA3GQ9NS98 782 aa10.68□□□□□ -0.7
MCF2-207ENST00000483690 NOP58Q9Y2X3 529 aaKnown RBP10.68□□□□□ -0.7
MCF2-207ENST00000483690 MSTNO14793 375 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 KCNQ2O43526 872 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 DYRK3O43781 588 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 IGBP1P78318 339 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 EEF1DP3Q658K8 133 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 KREMEN2Q8NCW0 462 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 GPRC5CQ9NQ84 441 aa10.67□□□□□ -0.7
MCF2-207ENST00000483690 MAGEC2Q9UBF1 373 aaPredicted RBP10.67□□□□□ -0.7
MCF2-207ENST00000483690 ZC3H7BQ9UGR2 993 aaKnown RBP10.67□□□□□ -0.7
MCF2-207ENST00000483690 PITPNM2Q9BZ72 1349 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 PRR19A6NJB7 356 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 MEFVO15553 781 aaPredicted RBP10.66□□□□□ -0.7
MCF2-207ENST00000483690 ENDOUP21128 410 aaKnown RBP10.66□□□□□ -0.7
MCF2-207ENST00000483690 ANAPC15P60006 121 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 NPLOC4Q8TAT6 608 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 FRS2Q8WU20 508 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 PCDH12Q9NPG4 1184 aa10.66□□□□□ -0.7
MCF2-207ENST00000483690 INTS7Q9NVH2 962 aaKnown RBP10.66□□□□□ -0.7
MCF2-207ENST00000483690 FKTNO75072 461 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 VIL1P09327 827 aaKnown RBP10.65□□□□□ -0.7
MCF2-207ENST00000483690 ACBD5Q5T8D3 534 aaPredicted RBP10.65□□□□□ -0.7
MCF2-207ENST00000483690 DENND5AQ6IQ26 1287 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 BRAPQ7Z569 592 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 CREG2Q8IUH2 290 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 GSTCDQ8NEC7 633 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 CDADC1Q9BWV3 514 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 ATP13A1Q9HD20 1204 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
MCF2-207ENST00000483690 APPP05067 770 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 PLS3P13797 630 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 SDSP20132 328 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 RTP2Q5QGT7 225 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
MCF2-207ENST00000483690 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 KRT26Q7Z3Y9 468 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 CHAC2Q8WUX2 184 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 ASB11Q8WXH4 323 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 TRIM39Q9HCM9 518 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 CLEC1BQ9P126 229 aa10.64□□□□□ -0.71
MCF2-207ENST00000483690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.63□□□□□ -0.71
MCF2-207ENST00000483690 AQP7O14520 342 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 PDE8AO60658 829 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 CNGA1P29973 690 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 EGR3Q06889 387 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 LRRTM3Q86VH5 581 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 MAGEB10Q96LZ2 347 aaPredicted RBP10.63□□□□□ -0.71
MCF2-207ENST00000483690 TRAF6Q9Y4K3 522 aa10.63□□□□□ -0.71
MCF2-207ENST00000483690 TRBV23OR9-2A0A075B6M9 112 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 A0A087X0B3 334 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 DNAJC8O75937 253 aaPredicted RBP10.62□□□□□ -0.71
MCF2-207ENST00000483690 PAMP19021 973 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 STAT3P40763 770 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 CNNM4Q6P4Q7 775 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 NAT16Q8N8M0 369 aa10.62□□□□□ -0.71
MCF2-207ENST00000483690 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 NPHP3-ACAD11A0A0J9YXS1 232 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 FGF10O15520 208 aaPredicted RBP10.61□□□□□ -0.71
MCF2-207ENST00000483690 ESR1P03372 595 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 SOX5P35711 763 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 LTBRP36941 435 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 PRKCQQ04759 706 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 KCNAB2Q13303 367 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 TESK1Q15569 626 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 AOC3Q16853 763 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 IQCEQ6IPM2 695 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 RSPO2Q6UXX9 243 aaPredicted RBP10.61□□□□□ -0.71
MCF2-207ENST00000483690 FGD2Q7Z6J4 655 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 DIO2Q92813 273 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 PTCHD1Q96NR3 888 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 ZFYVE21Q9BQ24 234 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 CAAP1Q9H8G2 361 aa10.61□□□□□ -0.71
MCF2-207ENST00000483690 OPA1O60313 960 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 TGFB1P01137 390 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 NAT1P18440 290 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 RPL10P27635 214 aaKnown RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 HOXA10P31260 410 aaPredicted RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 AMPD3Q01432 767 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 TEKQ02763 1124 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 WAPLQ7Z5K2 1190 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 MISP3Q96FF7 219 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 TARS2Q9BW92 718 aaKnown RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 GPR27Q9NS67 375 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 TMEFF2Q9UIK5 374 aaPredicted RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 VAV3Q9UKW4 847 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 MAPRE3Q9UPY8 281 aa10.6□□□□□ -0.71
MCF2-207ENST00000483690 TNPO3Q9Y5L0 923 aaKnown RBP10.6□□□□□ -0.71
MCF2-207ENST00000483690 NPFFR2Q9Y5X5 522 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms