RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CDK2AP1O14519 115 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 HLA-DOAP06340 250 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 ADH1AP07327 375 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 TRIM27P14373 513 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 CYP2B6P20813 491 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 HOXA7P31268 230 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 ARHGAP4P98171 946 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 RRP1BQ14684 758 aaKnown RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 MAPKAPK5Q8IW41 473 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 C7orf61Q8IZ16 206 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 GPRC5AQ8NFJ5 357 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 SNIP1Q8TAD8 396 aaKnown RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 TGFBRAP1Q8WUH2 860 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 GPR108Q9NPR9 543 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 RAB6BQ9NRW1 208 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 GJD2Q9UKL4 321 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-207ENST00000483407 WASF2Q9Y6W5 498 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 DOCK2Q92608 1830 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 MYH13Q9UKX3 1938 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 TRIOBPQ9H2D6 2365 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 DGAT1O75907 488 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 XRCC5P13010 732 aaKnown RBP7.15□□□□□ -1.26
CSDE1-207ENST00000483407 ZKSCAN1P17029 563 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-207ENST00000483407 MAPK4P31152 587 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 BMP8BP34820 402 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 HERVK_113P62684 666 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 CLN3Q13286 438 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 MTMR3Q13615 1198 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 TNNI3KQ59H18 835 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 CERS3Q8IU89 383 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 SLC17A8Q8NDX2 589 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 TRIB2Q92519 343 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 P2RX7Q99572 595 aaKnown RBP7.15□□□□□ -1.26
CSDE1-207ENST00000483407 DBNDD2Q9BQY9 259 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 C11orf49Q9H6J7 331 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 OGDHLQ9ULD0 1010 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 ZBTB21Q9ULJ3 1066 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 ZMYND8Q9ULU4 1186 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-207ENST00000483407 FPGT-TNNI3KV9GXZ4 949 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 FLT1P17948 1338 aa7.15□□□□□ -1.26
CSDE1-207ENST00000483407 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 SURF6O75683 361 aaKnown RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 GLRX3O76003 335 aaKnown RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 GDF11O95390 407 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 RGS2P41220 211 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 USP5P45974 858 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 PSMA6P60900 246 aaKnown RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 ERVK-24P63145 666 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 CCNA1P78396 465 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 FOXC1Q12948 553 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 CBLBQ13191 982 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 DOCK1Q14185 1865 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 MAP3K21Q5TCX8 1036 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 ZKSCAN2Q63HK3 967 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 METTL16Q86W50 562 aaKnown RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 VTI1AQ96AJ9 217 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 ITPKCQ96DU7 683 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 ZNF512BQ96KM6 892 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 FEZ1Q99689 392 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 GDF15Q99988 308 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 PAGR1Q9BTK6 254 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 DNAJC18Q9H819 358 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 TXNRD2Q9NNW7 524 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 SAP30BPQ9UHR5 308 aaKnown RBP7.14□□□□□ -1.27
CSDE1-207ENST00000483407 DCTN4Q9UJW0 460 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 MYH2Q9UKX2 1941 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 PALD1Q9ULE6 856 aa7.14□□□□□ -1.27
CSDE1-207ENST00000483407 CCER2I3L3R5 266 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 SOX1O00570 391 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-207ENST00000483407 GDF9O60383 454 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 BCAR3O75815 825 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 IDH1O75874 414 aaKnown RBP7.13□□□□□ -1.27
CSDE1-207ENST00000483407 FAM13AO94988 1023 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 CYP7A1P22680 504 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 PTGIRP43119 386 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 ZAP70P43403 619 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 USP14P54578 494 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 ATP8B2P98198 1209 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 TLR1Q15399 786 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 TBCELQ5QJ74 424 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 TMED8Q6PL24 325 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-207ENST00000483407 GPR142Q7Z601 462 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 PLEKHH3Q7Z736 793 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 ADGRA1Q86SQ6 560 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 NPAS4Q8IUM7 802 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 FTSJ3Q8IY81 847 aaKnown RBP7.13□□□□□ -1.27
CSDE1-207ENST00000483407 TMEM57Q8N5G2 664 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 SSH3Q8TE77 659 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 APBA2Q99767 749 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 RBPJLQ9UBG7 517 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 SERPINB13Q9UIV8 391 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms