RNA–Protein interactions for RNA: ENST00000483285.1

NUP98-211, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-211ENST00000483285 UPF3AQ9H1J1 476 aaKnown RBP12.97□□□□□ -0.33
NUP98-211ENST00000483285 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.96□□□□□ -0.33
NUP98-211ENST00000483285 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 ACRP10323 421 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 CSF2RAP15509 400 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 DNAJB2P25686 324 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 SLC16A2P36021 539 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 FSCN1Q16658 493 aaKnown RBP12.96□□□□□ -0.33
NUP98-211ENST00000483285 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 FBXO16Q8IX29 292 aaPredicted RBP12.96□□□□□ -0.33
NUP98-211ENST00000483285 DCAF4Q8WV16 495 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 TIFAQ96CG3 184 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.335e-8■□□□□ 8.8
NUP98-211ENST00000483285 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 TBX21Q9UL17 535 aa12.96□□□□□ -0.33
NUP98-211ENST00000483285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
NUP98-211ENST00000483285 ZNF536O15090 1300 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 FRMPD2Q68DX3 1309 aaPredicted RBP12.95□□□□□ -0.34
NUP98-211ENST00000483285 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 PLA2G6O60733 806 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 CABYRO75952 493 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 CYP2C18P33260 490 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 CDK7P50613 346 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 PSRC1Q6PGN9 363 aaPredicted RBP12.95□□□□□ -0.34
NUP98-211ENST00000483285 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 RASGRP2Q7LDG7 609 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 FAM126BQ8IXS8 530 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 PPM1EQ8WY54 764 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
NUP98-211ENST00000483285 IL17RBQ9NRM6 502 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
NUP98-211ENST00000483285 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
NUP98-211ENST00000483285 ICAM1P05362 532 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 SMPD1P17405 629 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 CALML3P27482 149 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 GRIN2CQ14957 1233 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 TMEM240Q5SV17 173 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 ZNF365Q70YC5 407 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 GAS2L1Q99501 681 aaPredicted RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 MPHOSPH6Q99547 160 aaKnown RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 HIPK3Q9H422 1215 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 ZNF576Q9H609 170 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 ADD3Q9UEY8 706 aaKnown RBP12.94□□□□□ -0.34
NUP98-211ENST00000483285 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
NUP98-211ENST00000483285 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 ORC4O43929 436 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 FGBP02675 491 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 CCL23P55773 120 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 HAND2P61296 217 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 PSMC6P62333 389 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 BAATQ14032 418 aaPredicted RBP12.93□□□□□ -0.34
NUP98-211ENST00000483285 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 VTA1Q9NP79 307 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
NUP98-211ENST00000483285 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
NUP98-211ENST00000483285 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
NUP98-211ENST00000483285 ASTN1O14525 1302 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 CTAGE5O15320 804 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 FGAP02671 866 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 MYL3P08590 195 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 PTGS1P23219 599 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 PDE1AP54750 535 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 WDR11Q9BZH6 1224 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 RANBP17Q9H2T7 1088 aaKnown RBP12.92□□□□□ -0.34
NUP98-211ENST00000483285 IL23AQ9NPF7 189 aa12.92□□□□□ -0.34
NUP98-211ENST00000483285 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
NUP98-211ENST00000483285 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 FOXP2O15409 715 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 CD4P01730 458 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 PBX2P40425 430 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
NUP98-211ENST00000483285 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 PDE4DQ08499 809 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
NUP98-211ENST00000483285 ALX1Q15699 326 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 RAB30Q15771 203 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 BRDTQ58F21 947 aaPredicted RBP12.91□□□□□ -0.34
NUP98-211ENST00000483285 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
NUP98-211ENST00000483285 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms