RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
MRPL55-229ENST00000483159 COL11A1P12107 1806 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-229ENST00000483159 BRCA2P51587 3418 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 LOC102724159A0A0B4J2E5 919 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
MRPL55-229ENST00000483159 FARP2O94887 1054 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-229ENST00000483159 SMARCA1P28370 1054 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 KIF5BP33176 963 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 PWP2Q15269 919 aaKnown RBP14.39□□□□□ -0.11
MRPL55-229ENST00000483159 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 CLEC4DQ8WXI8 215 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 MTMR8Q96EF0 704 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 RIOX1Q9H6W3 641 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 ABCB11O95342 1321 aa14.39□□□□□ -0.11
MRPL55-229ENST00000483159 KIAA0100Q14667 2235 aaKnown RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 TNRC18O15417 2968 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 ASB14A6NK59 587 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 ZBTB5O15062 677 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 EIF5BO60841 1220 aaKnown RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 SNAI1O95863 264 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 GNAQP50148 359 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 ADCK5Q3MIX3 580 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 PRAMEF19Q5SWL8 479 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 NSMFQ6X4W1 530 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 NECAB2Q7Z6G3 386 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 CTCFLQ8NI51 663 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 FGD4Q96M96 766 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 LZTS2Q9BRK4 669 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 ABHD16BQ9H3Z7 469 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 VAT1LQ9HCJ6 419 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
MRPL55-229ENST00000483159 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
MRPL55-229ENST00000483159 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 NFIBO00712 420 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-229ENST00000483159 BAATQ14032 418 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-229ENST00000483159 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-229ENST00000483159 SYNE3Q6ZMZ3 975 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 MCF2L2Q86YR7 1114 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 ARRDC4Q8NCT1 418 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 NUP133Q8WUM0 1156 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 HTATIP2Q9BUP3 242 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 USP26Q9BXU7 913 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
MRPL55-229ENST00000483159 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
MRPL55-229ENST00000483159 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 PSMA5P28066 241 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-229ENST00000483159 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 USH1GQ495M9 461 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 PAWRQ96IZ0 340 aaKnown RBP14.36□□□□□ -0.11
MRPL55-229ENST00000483159 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-229ENST00000483159 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
MRPL55-229ENST00000483159 FAM184BQ9ULE4 1060 aa14.36□□□□□ -0.11
MRPL55-229ENST00000483159 B4DLN1 442 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 CYTH3O43739 400 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 RARBP10826 455 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 AKR1A1P14550 325 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 TAL1P17542 331 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-229ENST00000483159 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
MRPL55-229ENST00000483159 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
MRPL55-229ENST00000483159 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
MRPL55-229ENST00000483159 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
MRPL55-229ENST00000483159 SPZ1Q9BXG8 430 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
MRPL55-229ENST00000483159 MKI67P46013 3256 aaKnown RBP14.34□□□□□ -0.11
MRPL55-229ENST00000483159 DNM1LO00429 736 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 COL6A1P12109 1028 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 RCAN1P53805 252 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 GHRHRQ02643 423 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 BLOC1S2Q6QNY1 142 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 PIGSQ96S52 555 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 MYL10Q9BUA6 226 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 C11orf49Q9H6J7 331 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 ASTN1O14525 1302 aa14.34□□□□□ -0.11
MRPL55-229ENST00000483159 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-229ENST00000483159 CALML3P27482 149 aa14.33□□□□□ -0.12
MRPL55-229ENST00000483159 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-229ENST00000483159 FGD1P98174 961 aa14.33□□□□□ -0.12
MRPL55-229ENST00000483159 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
MRPL55-229ENST00000483159 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms