RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 GRM1Q13255 1194 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PLS1Q14651 629 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 CUL5Q93034 780 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PTPN18Q99952 460 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PEX10O60683 326 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 BAG4O95429 457 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 HERVK_113P62684 666 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 POTEEQ6S8J3 1075 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 HOMER2Q9NSB8 354 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 TFIP11Q9UBB9 837 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 M0R2N6 131 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 CYP2C8P10632 490 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 UBE2SQ16763 222 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 USP17L6PQ6QN14 398 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 TMEM260Q9NX78 707 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-205ENST00000482968 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
PHGDH-205ENST00000482968 ABCB11O95342 1321 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-205ENST00000482968 OPLAHO14841 1288 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 OAZ1P54368 228 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 MYSM1Q5VVJ2 828 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 SNRNP48Q6IEG0 339 aaKnown RBP17.22■□□□□ 0.35
PHGDH-205ENST00000482968 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
PHGDH-205ENST00000482968 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 GBP4Q96PP9 640 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
PHGDH-205ENST00000482968 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CFBP00751 764 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 STAT3P40763 770 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 APLP1P51693 650 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CYP4F22Q6NT55 531 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 TRERF1Q96PN7 1200 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 PNMA2Q9UL42 364 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
PHGDH-205ENST00000482968 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 MEIS2O14770 477 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 ATP2A1O14983 1001 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 DEFB115Q30KQ5 88 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-205ENST00000482968 TEX13BQ9BXU2 312 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 CREBZFQ9NS37 354 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-205ENST00000482968 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
PHGDH-205ENST00000482968 KRT85P78386 507 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 GSE1Q14687 1217 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-205ENST00000482968 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
PHGDH-205ENST00000482968 GDPD2Q9HCC8 539 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
PHGDH-205ENST00000482968 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 NFIBO00712 420 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-205ENST00000482968 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 ZIC5Q96T25 663 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
PHGDH-205ENST00000482968 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-205ENST00000482968 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHGDH-205ENST00000482968 CNMDO75829 334 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 INHBEP58166 350 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 INF2Q27J81 1249 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 Q3C1V9 767 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 RILPL1Q5EBL4 403 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms