RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 FARP2O94887 1054 aaPredicted RBP21.38■■□□□ 1.01
SMIM4-204ENST00000482728 FGD1P98174 961 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 CNTN2Q02246 1040 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 COL9A3Q14050 684 aaPredicted RBP21.38■■□□□ 1.01
SMIM4-204ENST00000482728 QRICH1Q2TAL8 776 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 FBXO11Q86XK2 927 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 FAM133AQ8N9E0 248 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 KCNB2Q92953 911 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 MAP3K14Q99558 947 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 CYP39A1Q9NYL5 469 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 DDX20Q9UHI6 824 aaKnown RBP21.38■■□□□ 1.01
SMIM4-204ENST00000482728 SNX14Q9Y5W7 946 aa21.38■■□□□ 1.01
SMIM4-204ENST00000482728 BAZ2BQ9UIF8 2168 aaKnown RBP21.37■■□□□ 1.01
SMIM4-204ENST00000482728 PLXNA1Q9UIW2 1896 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 PTPDC1A2A3K4 754 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 NFIBO00712 420 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 CALM1P0DP23 149 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 CALM2P0DP24 149 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 CALM3P0DP25 149 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 EXOSC10Q01780 885 aaKnown RBP21.37■■□□□ 1.01
SMIM4-204ENST00000482728 BAATQ14032 418 aaPredicted RBP21.37■■□□□ 1.01
SMIM4-204ENST00000482728 MAMDC4Q6UXC1 1216 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 ANKLE1Q8NAG6 615 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 JAKMIP1Q96N16 626 aaKnown RBP21.37■■□□□ 1.01
SMIM4-204ENST00000482728 MYL10Q9BUA6 226 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 OGDHLQ9ULD0 1010 aa21.37■■□□□ 1.01
SMIM4-204ENST00000482728 ABCB11O95342 1321 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 SYNGAP1Q96PV0 1343 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 SEPT4O43236 478 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 PSMA5P28066 241 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 GNAQP50148 359 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 TRAF1Q13077 416 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 LHX8Q68G74 356 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 RNF207Q6ZRF8 634 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 CLEC4DQ8WXI8 215 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 TCEANC2Q96MN5 208 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 LZTS2Q9BRK4 669 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 AMNQ9BXJ7 453 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 USP26Q9BXU7 913 aa21.36■■□□□ 1.01
SMIM4-204ENST00000482728 ADD3Q9UEY8 706 aaKnown RBP21.36■■□□□ 1.01
SMIM4-204ENST00000482728 MRPL11Q9Y3B7 192 aaKnown RBP21.36■■□□□ 1.01
SMIM4-204ENST00000482728 ASB14A6NK59 587 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 ZBTB5O15062 677 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
SMIM4-204ENST00000482728 CALML3P27482 149 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 BLOC1S2Q6QNY1 142 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 SGMS1Q86VZ5 419 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 HOMER1Q86YM7 354 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 RIOX1Q9H6W3 641 aa21.35■■□□□ 1.01
SMIM4-204ENST00000482728 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.35■■□□□ 1.01
SMIM4-204ENST00000482728 SOWAHBA6NEL2 793 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 SNAI1O95863 264 aaPredicted RBP21.34■■□□□ 1.01
SMIM4-204ENST00000482728 ARMCX2Q7L311 632 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 NECAB2Q7Z6G3 386 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 MCF2L2Q86YR7 1114 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 MTMR8Q96EF0 704 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 PAWRQ96IZ0 340 aaKnown RBP21.34■■□□□ 1.01
SMIM4-204ENST00000482728 PIGSQ96S52 555 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 ABHD16BQ9H3Z7 469 aa21.34■■□□□ 1.01
SMIM4-204ENST00000482728 BRCA2P51587 3418 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 RXRAP19793 462 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 ANO1Q5XXA6 986 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 FANCBQ8NB91 859 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 ARRDC4Q8NCT1 418 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 FGD4Q96M96 766 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 ZHX1Q9UKY1 873 aaPredicted RBP21.33■■□□□ 1.01
SMIM4-204ENST00000482728 PCDHA1Q9Y5I3 950 aa21.33■■□□□ 1.01
SMIM4-204ENST00000482728 MYH6P13533 1939 aa21.33■■□□□ 1
SMIM4-204ENST00000482728 PNMA6FA0A0J9YX94 578 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 ZNF865P0CJ78 1059 aaPredicted RBP21.32■■□□□ 1
SMIM4-204ENST00000482728 RARBP10826 455 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 CPA1P15085 419 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 SMARCA1P28370 1054 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 RPS6P62753 249 aaKnown RBP21.32■■□□□ 1
SMIM4-204ENST00000482728 ACVR2BQ13705 512 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 UBE2Q1Q7Z7E8 422 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 MICU3Q86XE3 530 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 RRP36Q96EU6 259 aaKnown RBP21.32■■□□□ 1
SMIM4-204ENST00000482728 MPHOSPH6Q99547 160 aaKnown RBP21.32■■□□□ 1
SMIM4-204ENST00000482728 HTATIP2Q9BUP3 242 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 MAF1Q9H063 256 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 FAM184BQ9ULE4 1060 aa21.32■■□□□ 1
SMIM4-204ENST00000482728 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
SMIM4-204ENST00000482728 CYTH3O43739 400 aa21.31■■□□□ 1
SMIM4-204ENST00000482728 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
SMIM4-204ENST00000482728 AKR1A1P14550 325 aa21.31■■□□□ 1
SMIM4-204ENST00000482728 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
SMIM4-204ENST00000482728 SLC35G1Q2M3R5 365 aa21.31■■□□□ 1
SMIM4-204ENST00000482728 SLC30A10Q6XR72 485 aa21.31■■□□□ 1
SMIM4-204ENST00000482728 PURBQ96QR8 312 aaKnown RBP21.31■■□□□ 1
SMIM4-204ENST00000482728 SPZ1Q9BXG8 430 aa21.31■■□□□ 1
SMIM4-204ENST00000482728 B4DLN1 442 aa21.3■■□□□ 1
SMIM4-204ENST00000482728 ZBTB43O43298 467 aa21.3■■□□□ 1
SMIM4-204ENST00000482728 RPS6KB1P23443 525 aa21.3■■□□□ 1
SMIM4-204ENST00000482728 MRPL12P52815 198 aaKnown RBP21.3■■□□□ 1
SMIM4-204ENST00000482728 APOA5Q6Q788 366 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms