RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PKN1Q16512 942 aa17.7■□□□□ 0.42
CCM2-215ENST00000482714 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
CCM2-215ENST00000482714 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
CCM2-215ENST00000482714 ERCC3P19447 782 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 SNAP25P60880 206 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 ERO1AQ96HE7 468 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 ACAD9Q9H845 621 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 BARHL2Q9NY43 387 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 RIPK3Q9Y572 518 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 ALAS1P13196 640 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
CCM2-215ENST00000482714 HOXD10P28358 340 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 LACTBP83111 547 aaPredicted RBP17.69■□□□□ 0.42
CCM2-215ENST00000482714 GHRHRQ02643 423 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 COL13A1Q5TAT6 717 aaPredicted RBP17.69■□□□□ 0.42
CCM2-215ENST00000482714 NCAPG2Q86XI2 1143 aa17.69■□□□□ 0.42
CCM2-215ENST00000482714 PTPDC1A2A3K4 754 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 PPP1R11O60927 126 aaPredicted RBP17.68■□□□□ 0.42
CCM2-215ENST00000482714 FCER1AP12319 257 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
CCM2-215ENST00000482714 MRPL12P52815 198 aaKnown RBP17.68■□□□□ 0.42
CCM2-215ENST00000482714 FCGRTP55899 365 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 CCDC148Q8NFR7 591 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 COA7Q96BR5 231 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 RNF146Q9NTX7 359 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 IVNS1ABPQ9Y6Y0 642 aa17.68■□□□□ 0.42
CCM2-215ENST00000482714 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 PTPREP23469 700 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 GNA11P29992 359 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 CTCFP49711 727 aaPredicted RBP17.67■□□□□ 0.42
CCM2-215ENST00000482714 PRMT2P55345 433 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 KCTD2Q14681 263 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 CLEC4DQ8WXI8 215 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 PIBF1Q8WXW3 757 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 PORCNQ9H237 461 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 EFCC1Q9HA90 598 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
CCM2-215ENST00000482714 SLC15A5A6NIM6 579 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 PSMC4P43686 418 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 USH1GQ495M9 461 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 HEATR3Q7Z4Q2 680 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 GPR142Q7Z601 462 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 ZNF296Q8WUU4 475 aaPredicted RBP17.66■□□□□ 0.42
CCM2-215ENST00000482714 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
CCM2-215ENST00000482714 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 PFASO15067 1338 aa17.66■□□□□ 0.42
CCM2-215ENST00000482714 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 STXBP3O00186 592 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 JAK2O60674 1132 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 PEX10O60683 326 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 CALML3P27482 149 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
CCM2-215ENST00000482714 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 NAPAP54920 295 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 ANKRD35Q8N283 1001 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 ALG1Q9BT22 464 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 C6orf50Q9HD87 102 aa17.65■□□□□ 0.42
CCM2-215ENST00000482714 DIS3Q9Y2L1 958 aaKnown RBP17.65■□□□□ 0.42
CCM2-215ENST00000482714 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 SMCO2A6NFE2 343 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 TNPO2O14787 897 aaKnown RBP17.64■□□□□ 0.41
CCM2-215ENST00000482714 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
CCM2-215ENST00000482714 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
CCM2-215ENST00000482714 RNF207Q6ZRF8 634 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 DDX11Q96FC9 970 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 MMP19Q99542 508 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 RIC8AQ9NPQ8 531 aa17.64■□□□□ 0.41
CCM2-215ENST00000482714 GCOM1H8Y6P7 765 aaPredicted RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 PDCP20941 246 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 TRIM29Q14134 588 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 GRB14Q14449 540 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 CUL5Q93034 780 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 GJD2Q9UKL4 321 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 MYH6P13533 1939 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 FOSP01100 380 aaPredicted RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 HOXC6P09630 235 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 XRCC5P13010 732 aaKnown RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 HSD17B4P51659 736 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 LBX1P52954 281 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 NLRP5P59047 1200 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 MORN1Q5T089 497 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms