RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CST5P28325 142 aaPredicted RBP15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 SLC16A2P36021 539 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 NT5C2P49902 561 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 GJA9P57773 515 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 VTI1AQ96AJ9 217 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 RANBP17Q9H2T7 1088 aaKnown RBP15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 GPCPD1Q9NPB8 672 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 TRIM43BA6NCK2 446 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 MYADML2A6NDP7 307 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 SOWAHBA6NEL2 793 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 DCDC2CA8MYV0 355 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 PQBP1O60828 265 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 ELP1O95163 1332 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 PTGS1P23219 599 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 MUM1L1Q5H9M0 696 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 GNASQ5JWF2 1037 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 SYDE2Q5VT97 1194 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 TRIM43Q96BQ3 446 aaPredicted RBP15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 KATNBL1Q9H079 304 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 TMEM39AQ9NV64 488 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 CYP39A1Q9NYL5 469 aa15.81■□□□□ 0.12
CTDSP1-208ENST00000482272 MROH7Q68CQ1 1323 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 ASGR1P07306 291 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 PDHBP11177 359 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 RAG1P15918 1043 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 TNFAIP2Q03169 654 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 ANKRD33Q7Z3H0 272 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 IQCA1Q86XH1 822 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 DGKHQ86XP1 1220 aa15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 UPF3AQ9H1J1 476 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 ADD3Q9UEY8 706 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-208ENST00000482272 KIAA0355O15063 1070 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 SHHQ15465 462 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 IQSEC1Q6DN90 963 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 Q7L0L9 218 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 ZKSCAN3Q9BRR0 538 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 DSCC1Q9BVC3 393 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 CTNNA3Q9UI47 895 aa15.79■□□□□ 0.12
CTDSP1-208ENST00000482272 NKX3-2P78367 333 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 ZNF543Q08ER8 600 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 FAAP100Q0VG06 881 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 TMEM63BQ5T3F8 832 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 GPATCH4Q5T3I0 446 aaKnown RBP15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 FAM109BQ6ICB4 259 aaPredicted RBP15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 AP5M1Q9H0R1 490 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 Q9Y3F1 56 aa15.78■□□□□ 0.12
CTDSP1-208ENST00000482272 LOC102724159A0A0B4J2E5 919 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 A0A0U1RQG5 324 aaPredicted RBP15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 PTPDC1A2A3K4 754 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 ARVCFO00192 962 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 CTAGE5O15320 804 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 ZEB2O60315 1214 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 KDM4AO75164 1064 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 SNHG28P0DPA3 235 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 ITGB8P26012 769 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 PWP2Q15269 919 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 MPHOSPH6Q99547 160 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 CPVLQ9H3G5 476 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 KAT14Q9H8E8 782 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-208ENST00000482272 TLR3O15455 904 aaKnown RBP15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 DYNC1LI2O43237 492 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 CABYRO75952 493 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 SMPD1P17405 629 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 CDK7P50613 346 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 C9orf50Q5SZB4 431 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 TTC22Q5TAA0 569 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 TAPT1Q6NXT6 567 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 RNF207Q6ZRF8 634 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 KIAA1211Q6ZU35 1233 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 TLK2Q86UE8 772 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 MORC4Q8TE76 937 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 KRT23Q9C075 422 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 PDGFCQ9NRA1 345 aa15.76■□□□□ 0.11
CTDSP1-208ENST00000482272 B4DLN1 442 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 B4E1Z4 1266 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 NFIBO00712 420 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 TIMP1P01033 207 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 GOLGA8HP0CJ92 632 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 CALML3P27482 149 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 ALDH5A1P51649 535 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 MRPL12P52815 198 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 BEX3Q00994 111 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 FPGSQ05932 587 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 FSCN1Q16658 493 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms