RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
HPS4-212ENST00000481910 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 CA12O43570 354 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 TLR2O60603 784 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 ICAM1P05362 532 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 SCG2P13521 617 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 CRHR2Q13324 411 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 PKN1Q16512 942 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
HPS4-212ENST00000481910 USH1GQ495M9 461 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 FBXO11Q86XK2 927 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 REPS2Q8NFH8 660 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 AGBL1Q96MI9 1066 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 TXNRD2Q9NNW7 524 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 ZNF536O15090 1300 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 STK36Q9NRP7 1315 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 MAFGO15525 162 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
HPS4-212ENST00000481910 TRPA1O75762 1119 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 GJB2P29033 226 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 STAT3P40763 770 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 OAZ1P54368 228 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 WASF1Q92558 559 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 GPKOWQ92917 476 aaPredicted RBP eCLIP13.35□□□□□ -0.27
HPS4-212ENST00000481910 CPA4Q9UI42 421 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
HPS4-212ENST00000481910 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 PCDHA1Q9Y5I3 950 aa13.35□□□□□ -0.27
HPS4-212ENST00000481910 SMCHD1A6NHR9 2005 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 TRAF1Q13077 416 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 Q3C1V9 767 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
HPS4-212ENST00000481910 FAM43BQ6ZT52 329 aaPredicted RBP13.34□□□□□ -0.27
HPS4-212ENST00000481910 GPRC5AQ8NFJ5 357 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 COA7Q96BR5 231 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 SPATC1LQ9H0A9 340 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
HPS4-212ENST00000481910 CNMDO75829 334 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 ALAS1P13196 640 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 ERVK-9P63128 1117 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 ERVK-24P63145 666 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 MAP2K1Q02750 393 aaPredicted RBP13.33□□□□□ -0.28
HPS4-212ENST00000481910 WWC2Q6AWC2 1192 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 AIFM3Q96NN9 605 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 ALG1Q9BT22 464 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 hCG_1984214I3L0E3 225 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 TAL1P17542 331 aaPredicted RBP13.33□□□□□ -0.28
HPS4-212ENST00000481910 GSE1Q14687 1217 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 ZNF713Q8N859 430 aaPredicted RBP13.33□□□□□ -0.28
HPS4-212ENST00000481910 BEGAINQ9BUH8 593 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 RIPK3Q9Y572 518 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
HPS4-212ENST00000481910 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 XBP1P17861 261 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 NAPAP54920 295 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 CCNA1P78396 465 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 RIOX2Q8IUF8 465 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 CCAR1Q8IX12 1150 aaKnown RBP13.32□□□□□ -0.28
HPS4-212ENST00000481910 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 MOV10L1Q9BXT6 1211 aaKnown RBP13.32□□□□□ -0.28
HPS4-212ENST00000481910 R3HDMLQ9H3Y0 253 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
HPS4-212ENST00000481910 ABCB11O95342 1321 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 STXBP3O00186 592 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 BCRP11274 1271 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 FOSBP53539 338 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 CCDC12Q8WUD4 166 aaPredicted RBP13.31□□□□□ -0.28
HPS4-212ENST00000481910 SH3GLB2Q9NR46 395 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 MRPL11Q9Y3B7 192 aaKnown RBP13.31□□□□□ -0.28
HPS4-212ENST00000481910 SLC25A27O95847 323 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 TPM2P07951 284 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 ERCC3P19447 782 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 TRIM29Q14134 588 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
HPS4-212ENST00000481910 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 CFHR5Q9BXR6 569 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
HPS4-212ENST00000481910 NLRP5P59047 1200 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms