RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	CYBB	P04839	570 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	GSN	P06396	782 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	MC3R	P41968	323 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	ZFYVE27	Q5T4F4	411 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	HLA-DQA1	Q5Y7H0	255 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	PAQR3	Q6TCH7	311 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	DDX1	Q92499	740 aa	Known RBP	5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173	ADAMTS1	Q9UHI8	967 aa		5.85	□□□□□ -1.47
CCNL1-223	ENST00000481173		F8W031	263 aa	Predicted RBP	5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	PRR5	P85299	388 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	APOBR	Q0VD83	1088 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	TDRD10	Q5VZ19	366 aa	Known RBP	5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	CWF19L1	Q69YN2	538 aa	Known RBP	5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	CCDC144CP	Q8IYA2	1237 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	C7orf61	Q8IZ16	206 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	FAN1	Q9Y2M0	1017 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	DUSP10	Q9Y6W6	482 aa		5.84	□□□□□ -1.47
CCNL1-223	ENST00000481173	MEIS3P2	A8K0S8	358 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	SRGAP3	O43295	1099 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	ERCC3	P19447	782 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	CNR2	P34972	360 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	ZNF827	Q17R98	1081 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	SAPCD2	Q86UD0	394 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	REXO1	Q8N1G1	1221 aa	Known RBP	5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	BRF1	Q92994	677 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	BCL2L13	Q9BXK5	485 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	BCAS3	Q9H6U6	928 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	RXFP1	Q9HBX9	757 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	PDLIM7	Q9NR12	457 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	PRR13	Q9NZ81	148 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	SUCO	Q9UBS9	1254 aa	Known RBP	5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	GGT7	Q9UJ14	662 aa		5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	DBR1	Q9UK59	544 aa	Known RBP	5.83	□□□□□ -1.48
CCNL1-223	ENST00000481173	FGF10	O15520	208 aa	Predicted RBP	5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	ZNF165	P49910	485 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	HTRA3	P83110	453 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	DLX2	Q07687	328 aa	Predicted RBP	5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	DCAF15	Q66K64	600 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	GIPC2	Q8TF65	315 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	PALD1	Q9ULE6	856 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	MYRF	Q9Y2G1	1151 aa		5.82	□□□□□ -1.48
CCNL1-223	ENST00000481173	ASGR2	P07307	311 aa		5.81	□□□□□ -1.48
CCNL1-223	ENST00000481173	ACR	P10323	421 aa		5.81	□□□□□ -1.48
CCNL1-223	ENST00000481173	ZNF445	P59923	1031 aa		5.81	□□□□□ -1.48
CCNL1-223	ENST00000481173	NOL9	Q5SY16	702 aa	Known RBP	5.81	□□□□□ -1.48
CCNL1-223	ENST00000481173	FAM86C1	Q9NVL1	165 aa		5.81	□□□□□ -1.48
CCNL1-223	ENST00000481173	SH3D21	A4FU49	640 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	NCAM1	P13591	858 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	IFNGR1	P15260	489 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	CYP2R1	Q6VVX0	501 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	USP48	Q86UV5	1035 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	PPFIBP1	Q86W92	1011 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	ALG3	Q92685	438 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	NKD1	Q969G9	470 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	DHRS1	Q96LJ7	313 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	SRRT	Q9BXP5	876 aa	Known RBP	5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	RNF38	Q9H0F5	515 aa		5.8	□□□□□ -1.48
CCNL1-223	ENST00000481173	NOBOX	O60393	691 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	TP53	P04637	393 aa	Predicted RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	CD3E	P07766	207 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	PML	P29590	882 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	MAGEA10	P43363	369 aa	Predicted RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	GJA9	P57773	515 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	ZNF326	Q5BKZ1	582 aa	Known RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	SLITRK4	Q8IW52	837 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	CARF	Q8N187	725 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	FIBCD1	Q8N539	461 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	PTCHD1	Q96NR3	888 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	FCRL3	Q96P31	734 aa	Predicted RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	GP6	Q9HCN6	339 aa		5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	CNOT11	Q9UKZ1	510 aa	Known RBP	5.79	□□□□□ -1.48
CCNL1-223	ENST00000481173	PMS1	P54277	932 aa	Known RBP	5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	ADAM17	P78536	824 aa		5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	HS2ST1	Q7LGA3	356 aa		5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	B3GNT8	Q7Z7M8	397 aa		5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	NOX5	Q96PH1	765 aa		5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	LNPK	Q9C0E8	428 aa		5.78	□□□□□ -1.48
CCNL1-223	ENST00000481173	AKAP8	O43823	692 aa	Known RBP	5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	TNFRSF1A	P19438	455 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	ITGAE	P38570	1179 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	NOP2	P46087	812 aa	Known RBP	5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	CORO7	P57737	925 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZXDA	P98168	799 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	SMARCC2	Q8TAQ2	1214 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZDHHC15	Q96MV8	337 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	NT5C1A	Q9BXI3	368 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	NOL6	Q9H6R4	1146 aa	Known RBP	5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	SMPD4	Q9NXE4	827 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	FBLN5	Q9UBX5	448 aa		5.77	□□□□□ -1.49
CCNL1-223	ENST00000481173	TBC1D8	O95759	1140 aa		5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	ITGB3	P05106	788 aa		5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	GLI4	P10075	376 aa		5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	L1CAM	P32004	1257 aa		5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	MRPL58	Q14197	206 aa	Known RBP	5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	INTS3	Q68E01	1043 aa	Known RBP	5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZNF451	Q9Y4E5	1061 aa		5.76	□□□□□ -1.49
CCNL1-223	ENST00000481173	FHOD1	Q9Y613	1164 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms