RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 CLMNQ96JQ2 1002 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 SLC38A10Q9HBR0 1119 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 A0A0G2JLL6 359 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 CUTAO60888 179 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 AP3B2Q13367 1082 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 COG2Q14746 738 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 USH1GQ495M9 461 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 NOM1Q5C9Z4 860 aaKnown RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 CCDC174Q6PII3 467 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 PRRT2Q7Z6L0 340 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 GBA2Q9HCG7 927 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
SNRNP200-205ENST00000480835 ATP2B1P20020 1258 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 DSG3P32926 999 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 OAZ1P54368 228 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 DGKZQ13574 1117 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 JAKMIP3Q5VZ66 844 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 SLC10A4Q96EP9 437 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 ADAMTS5Q9UNA0 930 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 COL11A1P12107 1806 aaPredicted RBP16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 MYH7BA7E2Y1 1941 aa16.88■□□□□ 0.29
SNRNP200-205ENST00000480835 RBBP6Q7Z6E9 1792 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 PIK3CDO00329 1044 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 IRF6O14896 467 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 PTPREP23469 700 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 INF2Q27J81 1249 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 FASTKD5Q7L8L6 764 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 NEK8Q86SG6 692 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 KRI1Q8N9T8 703 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 HOXC10Q9NYD6 342 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 ZNF536O15090 1300 aa16.87■□□□□ 0.29
SNRNP200-205ENST00000480835 LAD1O00515 517 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 VWA5AO00534 786 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 MEIS2O14770 477 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 CELF2O95319 508 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 HOXA7P31268 230 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 ZNF174Q15697 407 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 UBE2SQ16763 222 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 CCDC73Q6ZRK6 1079 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 TBCKQ8TEA7 893 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 MRPS27Q92552 414 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 ATG4CQ96DT6 458 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 MAF1Q9H063 256 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 TMEM260Q9NX78 707 aa16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-205ENST00000480835 ATP2A1O14983 1001 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 CMA1P23946 247 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 ATP2C1P98194 919 aaPredicted RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 CAVIN1Q6NZI2 390 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 GADL1Q6ZQY3 521 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 ZNF579Q8NAF0 562 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 EHMT1Q9H9B1 1298 aa16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 MAP3K20Q9NYL2 800 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 FBXO2Q9UK22 296 aaPredicted RBP16.85■□□□□ 0.29
SNRNP200-205ENST00000480835 A0A0G2JMZ2 1700 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 GCOM1H8Y6P7 765 aaPredicted RBP16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 OPLAHO14841 1288 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 GCFC2P16383 781 aaKnown RBP16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 MCM7P33993 719 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 USP11P51784 963 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 GHRHRQ02643 423 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 PTGDRQ13258 359 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 FSIP1Q8NA03 581 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms