RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TBC1D8O95759 1140 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 GALK1P51570 392 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 CYP4F3Q08477 520 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 GALNT18Q6P9A2 607 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
CALD1-219ENST00000480638 CCDC113Q9H0I3 377 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.04□□□□□ -1.12
CALD1-219ENST00000480638 YBX2Q9Y2T7 364 aaKnown RBP8.04□□□□□ -1.12
CALD1-219ENST00000480638 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 RASGRF1Q13972 1273 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 RASA3Q14644 834 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 MPZL3Q6UWV2 235 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 JAMLQ86YT9 394 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 SGSM3Q96HU1 749 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 INTS4Q96HW7 963 aaKnown RBP8.03□□□□□ -1.12
CALD1-219ENST00000480638 GPRC5CQ9NQ84 441 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 IMPACTQ9P2X3 320 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 RNF114Q9Y508 228 aa8.03□□□□□ -1.12
CALD1-219ENST00000480638 CAPNS1P04632 268 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 THBDP07204 575 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 SNRPB2P08579 225 aaKnown RBP8.02□□□□□ -1.13
CALD1-219ENST00000480638 PAMP19021 973 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 SIRT2Q8IXJ6 389 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 NUP43Q8NFH3 380 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 UBXN4Q92575 508 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 ZNF669Q96BR6 464 aaPredicted RBP8.02□□□□□ -1.13
CALD1-219ENST00000480638 SLC6A17Q9H1V8 727 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 CRTAC1Q9NQ79 661 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 CLEC1BQ9P126 229 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 ACSL6Q9UKU0 697 aa8.02□□□□□ -1.13
CALD1-219ENST00000480638 TRBV23OR9-2A0A075B6M9 112 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 IQCA1LA6NCM1 817 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 SCG5P05408 212 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 PRKCAP17252 672 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 HOXC12P31275 282 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 L1CAMP32004 1257 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 GRIA2P42262 883 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 GFRA1P56159 465 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 LAPTM5Q13571 262 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 SF1Q15637 639 aaKnown RBP8.01□□□□□ -1.13
CALD1-219ENST00000480638 MTERF2Q49AM1 385 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 SPATC1Q76KD6 591 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 NPLOC4Q8TAT6 608 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 SNTG2Q9NY99 539 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 FAM53CQ9NYF3 392 aa8.01□□□□□ -1.13
CALD1-219ENST00000480638 NPHP3-ACAD11A0A0J9YXS1 232 aa8□□□□□ -1.13
CALD1-219ENST00000480638 LRRC10BA6NIK2 292 aa8□□□□□ -1.13
CALD1-219ENST00000480638 PLS3P13797 630 aa8□□□□□ -1.13
CALD1-219ENST00000480638 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
CALD1-219ENST00000480638 CPNE8Q86YQ8 564 aa8□□□□□ -1.13
CALD1-219ENST00000480638 LRRC47Q8N1G4 583 aaKnown RBP8□□□□□ -1.13
CALD1-219ENST00000480638 FRS2Q8WU20 508 aa8□□□□□ -1.13
CALD1-219ENST00000480638 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
CALD1-219ENST00000480638 OSBPL2Q9H1P3 480 aa8□□□□□ -1.13
CALD1-219ENST00000480638 ARHGEF4Q9NR80 690 aa8□□□□□ -1.13
CALD1-219ENST00000480638 FAM221BA6H8Z2 402 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 PNLIPP16233 465 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 ECI1P42126 302 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 KCNJ6P48051 423 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 CORO7P57737 925 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 MLANAQ16655 118 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 PRSS53Q2L4Q9 553 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 MBLAC2Q68D91 279 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 PRR23BQ6ZRT6 265 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 IRF2BP1Q8IU81 584 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 TMEM145Q8NBT3 493 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 MKL1Q969V6 931 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 C1orf159Q96HA4 380 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
CALD1-219ENST00000480638 SRPK1Q96SB4 655 aaKnown RBP7.99□□□□□ -1.13
CALD1-219ENST00000480638 AARSD1Q9BTE6 412 aaKnown RBP7.99□□□□□ -1.13
CALD1-219ENST00000480638 A0A1W2PQ27 194 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 A0A1W2PQ64 194 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 A0A1W2PQC6 194 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 A0A1W2PQD8 194 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 CPP00450 1065 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 CYP4F8P98187 520 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 MVKQ03426 396 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 HSP90AA2PQ14568 343 aaPredicted RBP7.98□□□□□ -1.13
CALD1-219ENST00000480638 ADGRF1Q5T601 910 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 KREMEN2Q8NCW0 462 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 MMP19Q99542 508 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 SPATA9Q9BWV2 254 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 NSUN3Q9H649 340 aaKnown RBP7.98□□□□□ -1.13
CALD1-219ENST00000480638 PFDN2Q9UHV9 154 aa7.98□□□□□ -1.13
CALD1-219ENST00000480638 PDE6BP35913 854 aa7.97□□□□□ -1.13
CALD1-219ENST00000480638 ARL4AP40617 200 aa7.97□□□□□ -1.13
CALD1-219ENST00000480638 SSRP1Q08945 709 aaKnown RBP7.97□□□□□ -1.13
CALD1-219ENST00000480638 IFRD2Q12894 506 aaPredicted RBP7.97□□□□□ -1.13
CALD1-219ENST00000480638 OGFOD2Q6N063 350 aa7.97□□□□□ -1.13
CALD1-219ENST00000480638 TNFRSF12AQ9NP84 129 aa7.97□□□□□ -1.13
CALD1-219ENST00000480638 C7orf72A4D263 438 aa7.96□□□□□ -1.14
CALD1-219ENST00000480638 DIAPH1O60610 1272 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms