RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KDM5DQ9BY66 1539 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 GAP43P17677 238 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 RBM6P78332 1123 aaKnown RBP10.41□□□□□ -0.74
VEGFA-212ENST00000480614 LRRC8CQ8TDW0 803 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ATP6V0A1Q93050 837 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 KIAA0232Q92628 1395 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 KLC3Q6P597 504 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 RPS6KC1Q96S38 1066 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 SUDS3Q9H7L9 328 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 MID2Q9UJV3 735 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 HEXIM1O94992 359 aaKnown RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 SEPT10Q9P0V9 454 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 FAF1Q9UNN5 650 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 RIPOR2Q9Y4F9 1068 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 TMEM191BP0C7N4 346 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 WHAMMQ8TF30 809 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 PSTPIP2Q9H939 334 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.4□□□□□ -0.743e-7■■■■■ 34.2
VEGFA-212ENST00000480614 EFCAB8A8MWE9 144 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 HAUS4Q9H6D7 363 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 PIK3CAP42336 1068 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 CFAP61Q8NHU2 1237 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 ZSCAN10Q96SZ4 725 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 KIFC3Q9BVG8 833 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 GUCY2FP51841 1108 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 ITKQ08881 620 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 IQCB1Q15051 598 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 EFCAB13Q8IY85 973 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 BLIDQ8IZY5 108 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 CPXCR1Q8N123 301 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 DDX39AO00148 427 aaKnown RBP10.4□□□□□ -0.74
VEGFA-212ENST00000480614 SERPINB6P35237 376 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 GCKRQ14397 625 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 ARMC9Q7Z3E5 817 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 ANKRD42Q8N9B4 389 aa10.4□□□□□ -0.74
VEGFA-212ENST00000480614 KIAA1468Q9P260 1216 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 STK38LQ9Y2H1 464 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF532Q9HCE3 1301 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 INHBAP08476 426 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF654Q8IZM8 581 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 NME8Q8N427 588 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 PHKBQ93100 1093 aa10.4□□□□□ -0.75
VEGFA-212ENST00000480614 MFAP3P55082 362 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 PPARAQ07869 468 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MICAL1Q8TDZ2 1067 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 NRBP2Q9NSY0 501 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 LCMT1Q9UIC8 334 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 H2AFZP0C0S5 128 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 LONP1P36776 959 aaKnown RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MFSD14BQ5SR56 506 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 H2AFVQ71UI9 128 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 KDRP35968 1356 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 CCDC197Q8NCU1 140 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 BAG2O95816 211 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ARHGAP44Q17R89 818 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 OTUD7BQ6GQQ9 843 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 NEK8Q86SG6 692 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF274Q96GC6 653 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ATP5JP18859 108 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MAEAQ7L5Y9 396 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 FBXO41Q8TF61 875 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 SPDL1Q96EA4 605 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 FAM89AQ96GI7 184 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MMS19Q96T76 1030 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 BAIAP2L1Q9UHR4 511 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ANGPTL3Q9Y5C1 460 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ERVV-2B6SEH9 535 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 TRAPPC10P48553 1259 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 TMTC4Q5T4D3 741 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 CDHR1Q96JP9 859 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 CAPN7Q9Y6W3 813 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 FAM135BQ49AJ0 1406 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MCF2LO15068 1137 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ZSCAN26Q16670 478 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 RRAGDQ9NQL2 400 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-212ENST00000480614 SLC13A4Q9UKG4 626 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 WDR64B1ANS9 1081 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 TMTC3Q6ZXV5 915 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 SLC52A2Q9HAB3 445 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 PCDHA12Q9UN75 941 aa10.39□□□□□ -0.75
VEGFA-212ENST00000480614 MAPKBP1O60336 1514 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 ABCC12Q96J65 1359 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 CMA1P23946 247 aa10.38□□□□□ -0.75
VEGFA-212ENST00000480614 CCNA1P78396 465 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms