RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CTAGE5O15320 804 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 TOP1P11387 765 aaKnown RBP22.23■■□□□ 1.15
ABCF3-214ENST00000480562 BEX3Q00994 111 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 TNFAIP2Q03169 654 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 NSMFQ6X4W1 530 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 PURBQ96QR8 312 aaKnown RBP22.23■■□□□ 1.15
ABCF3-214ENST00000480562 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 GPCPD1Q9NPB8 672 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 CYP39A1Q9NYL5 469 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 ELP1O95163 1332 aa22.23■■□□□ 1.15
ABCF3-214ENST00000480562 ASB14A6NK59 587 aa22.22■■□□□ 1.15
ABCF3-214ENST00000480562 PTGS1P23219 599 aa22.22■■□□□ 1.15
ABCF3-214ENST00000480562 CDK7P50613 346 aa22.22■■□□□ 1.15
ABCF3-214ENST00000480562 FPGSQ05932 587 aa22.22■■□□□ 1.15
ABCF3-214ENST00000480562 RNPC3Q96LT9 517 aaKnown RBP22.22■■□□□ 1.15
ABCF3-214ENST00000480562 FRMPD2Q68DX3 1309 aaPredicted RBP22.22■■□□□ 1.15
ABCF3-214ENST00000480562 CCDC171Q6TFL3 1326 aa22.22■■□□□ 1.15
ABCF3-214ENST00000480562 ICAM1P05362 532 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 SYDE2Q5VT97 1194 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 EEPD1Q7L9B9 569 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 SMC5Q8IY18 1101 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 RANBP17Q9H2T7 1088 aaKnown RBP22.21■■□□□ 1.15
ABCF3-214ENST00000480562 PDGFCQ9NRA1 345 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 TBX21Q9UL17 535 aa22.21■■□□□ 1.15
ABCF3-214ENST00000480562 A0A0U1RQG5 324 aaPredicted RBP22.2■■□□□ 1.14
ABCF3-214ENST00000480562 ARVCFO00192 962 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 TIMP1P01033 207 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 SMAD3P84022 425 aaKnown RBP22.2■■□□□ 1.14
ABCF3-214ENST00000480562 BTNL9Q6UXG8 535 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 TICAM2Q86XR7 235 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 TBC1D10CQ8IV04 446 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 FBXO16Q8IX29 292 aaPredicted RBP22.2■■□□□ 1.14
ABCF3-214ENST00000480562 SEMA6BQ9H3T3 888 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
ABCF3-214ENST00000480562 GNEQ9Y223 722 aaKnown RBP22.2■■□□□ 1.14
ABCF3-214ENST00000480562 ZMYM6O95789 1325 aa22.2■■□□□ 1.14
ABCF3-214ENST00000480562 IGHDP01880 384 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 SMPD1P17405 629 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 SDSP20132 328 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 NKX3-2P78367 333 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 AKNAD1Q5T1N1 836 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 TMEM63BQ5T3F8 832 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 CXCL17Q6UXB2 119 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 MFSD6Q6ZSS7 791 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 TLK2Q86UE8 772 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 MROH7Q68CQ1 1323 aa22.19■■□□□ 1.14
ABCF3-214ENST00000480562 LRRC37A2A6NM11 1700 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 NFIBO00712 420 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 DYNC1LI2O43237 492 aaPredicted RBP22.18■■□□□ 1.14
ABCF3-214ENST00000480562 PDHBP11177 359 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 AAMPQ13685 434 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 BAATQ14032 418 aaPredicted RBP22.18■■□□□ 1.14
ABCF3-214ENST00000480562 TAPT1Q6NXT6 567 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 CHD1LQ86WJ1 897 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 PLEKHM2Q8IWE5 1019 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 CDX2Q99626 313 aaPredicted RBP22.18■■□□□ 1.14
ABCF3-214ENST00000480562 TTYH1Q9H313 450 aaPredicted RBP22.18■■□□□ 1.14
ABCF3-214ENST00000480562 LCTP09848 1927 aa22.18■■□□□ 1.14
ABCF3-214ENST00000480562 FSCN1Q16658 493 aaKnown RBP22.17■■□□□ 1.14
ABCF3-214ENST00000480562 FAM126BQ8IXS8 530 aa22.17■■□□□ 1.14
ABCF3-214ENST00000480562 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
ABCF3-214ENST00000480562 AP5M1Q9H0R1 490 aa22.17■■□□□ 1.14
ABCF3-214ENST00000480562 NEDD4P46934 1319 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 NUCB1Q02818 461 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 ZNF543Q08ER8 600 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 IQSEC1Q6DN90 963 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 MFSD5Q6N075 450 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 EXOC6Q8TAG9 804 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 ZKSCAN3Q9BRR0 538 aa22.16■■□□□ 1.14
ABCF3-214ENST00000480562 PTPDC1A2A3K4 754 aa22.15■■□□□ 1.14
ABCF3-214ENST00000480562 CWC27Q6UX04 472 aaKnown RBP22.15■■□□□ 1.14
ABCF3-214ENST00000480562 KIAA1211Q6ZU35 1233 aa22.15■■□□□ 1.14
ABCF3-214ENST00000480562 TTC14Q96N46 770 aa22.15■■□□□ 1.14
ABCF3-214ENST00000480562 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.15■■□□□ 1.14
ABCF3-214ENST00000480562 VTA1Q9NP79 307 aa22.15■■□□□ 1.14
ABCF3-214ENST00000480562 TLR3O15455 904 aaKnown RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 PCP11498 1178 aaKnown RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 ALDH5A1P51649 535 aaPredicted RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 MFAP1P55081 439 aaKnown RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 SLC30A10Q6XR72 485 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 C16orf59Q7L2K0 433 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 MORC4Q8TE76 937 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 CLEC4DQ8WXI8 215 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 MYLIPQ8WY64 445 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 OSBPL3Q9H4L5 887 aa22.14■■□□□ 1.13
ABCF3-214ENST00000480562 RNF41Q9H4P4 317 aaPredicted RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 ADD3Q9UEY8 706 aaKnown RBP22.14■■□□□ 1.13
ABCF3-214ENST00000480562 UNC80Q8N2C7 3258 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 GRIN2DO15399 1336 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 ZNF213O14771 459 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 CD4P01730 458 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 GOLGA8HP0CJ92 632 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 SNHG28P0DPA3 235 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 CSF2RAP15509 400 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 CALML3P27482 149 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 PPIGQ13427 754 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■■■■□ 21
ABCF3-214ENST00000480562 ITGA7Q13683 1181 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 ESR2Q92731 530 aa22.13■■□□□ 1.13
ABCF3-214ENST00000480562 DIAPH3Q9NSV4 1193 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms