RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 BTAF1O14981 1849 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 ANKRD18BA2A2Z9 1011 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 H0YHG0 523 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 CPP00450 1065 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 APPBP2Q92624 585 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 TCEAL9Q9UHQ7 104 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.59
COMMD4-203ENST00000480484 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.59
COMMD4-203ENST00000480484 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.59
COMMD4-203ENST00000480484 NFXL1Q6ZNB6 911 aa11.33□□□□□ -0.59
COMMD4-203ENST00000480484 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.59
COMMD4-203ENST00000480484 CAGE1Q8TC20 777 aa11.33□□□□□ -0.59
COMMD4-203ENST00000480484 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.59
COMMD4-203ENST00000480484 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 TUBBP07437 444 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 INPP5BP32019 993 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 PSEN1P49768 467 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-203ENST00000480484 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
COMMD4-203ENST00000480484 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 ZNF213O14771 459 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 GYPCP04921 128 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 PLCD1P51178 756 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 IRAK1P51617 712 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-203ENST00000480484 MORC3Q14149 939 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-203ENST00000480484 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 MMS19Q96T76 1030 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 BLZF1Q9H2G9 400 aa11.33□□□□□ -0.6
COMMD4-203ENST00000480484 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 GPR37L1O60883 481 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
COMMD4-203ENST00000480484 USP14P54578 494 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 ERVK-24P63145 666 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 VPS16Q9H269 839 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
COMMD4-203ENST00000480484 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 GNGT1P63211 74 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 SWT1Q5T5J6 900 aaKnown RBP11.32□□□□□ -0.6
COMMD4-203ENST00000480484 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 APOA5Q6Q788 366 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 WDR75Q8IWA0 830 aaKnown RBP11.32□□□□□ -0.6
COMMD4-203ENST00000480484 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 RNF19AQ9NV58 838 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 NUP98P52948 1817 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 SYNRGQ9UMZ2 1314 aa11.32□□□□□ -0.6
COMMD4-203ENST00000480484 N4BP3O15049 544 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 PDE8BO95263 885 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 ADD2P35612 726 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 AARSP49588 968 aaKnown RBP eCLIP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 AMPD3Q01432 767 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 NTRK3Q16288 839 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 MYH8P13535 1937 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 CDKL5O76039 1030 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 MYBL2P10244 700 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 USP8P40818 1118 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 RNF187Q5TA31 235 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 SELENOOQ9BVL4 669 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 CYP2D7A0A087X1C5 515 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 MIGA1Q8NAN2 632 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
COMMD4-203ENST00000480484 FRMD4BQ9Y2L6 1034 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 CEP83Q9Y592 693 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
COMMD4-203ENST00000480484 MYH7P12883 1935 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 FAM237AA0A1B0GTK4 181 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 PDE8AO60658 829 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ATP1A1P05023 1023 aaKnown RBP11.3□□□□□ -0.6
COMMD4-203ENST00000480484 PDE6AP16499 860 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 KRT9P35527 623 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 MMP14P50281 582 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms