RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ZBED4O75132 1171 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 INHAP05111 366 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 ELNP15502 786 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 BMP8BP34820 402 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 STAT3P40763 770 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 RCAN1P53805 252 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 ST3GAL1Q11201 340 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 RTN1Q16799 776 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 CPXCR1Q8N123 301 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 NECAB1Q8N987 351 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
TRA2B-212ENST00000480461 PIGSQ96S52 555 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
TRA2B-212ENST00000480461 STXBP5LQ9Y2K9 1186 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 PARP14Q460N5 1801 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 PFKFB2O60825 505 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 TFRCP02786 760 aaKnown RBP14.21□□□□□ -0.13
TRA2B-212ENST00000480461 SMARCA1P28370 1054 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 KIF5BP33176 963 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRA2B-212ENST00000480461 SCRN1Q12765 414 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 MB21D1Q8N884 522 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.13
TRA2B-212ENST00000480461 COL25A1Q9BXS0 654 aaPredicted RBP14.21□□□□□ -0.13
TRA2B-212ENST00000480461 NID2Q14112 1375 aa14.21□□□□□ -0.14
TRA2B-212ENST00000480461 VCANP13611 3396 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
TRA2B-212ENST00000480461 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 CAPN2P17655 700 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 FLT3LGP49771 235 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 PLS1Q14651 629 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 PXYLP1Q8TE99 480 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 DIS3LQ8TF46 1054 aaKnown RBP14.2□□□□□ -0.14
TRA2B-212ENST00000480461 GTF3C2Q8WUA4 911 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-212ENST00000480461 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
TRA2B-212ENST00000480461 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 MTMR10Q9NXD2 777 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 LIMCH1Q9UPQ0 1083 aa14.2□□□□□ -0.14
TRA2B-212ENST00000480461 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-212ENST00000480461 ICAM1P05362 532 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 FDX1P10109 184 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 ERCC3P19447 782 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 GNAQP50148 359 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 OAZ1P54368 228 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 IRF5Q13568 498 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
TRA2B-212ENST00000480461 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 MUM1L1Q5H9M0 696 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
TRA2B-212ENST00000480461 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 CLEC4DQ8WXI8 215 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 LZTS2Q9BRK4 669 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
TRA2B-212ENST00000480461 GJD2Q9UKL4 321 aa14.19□□□□□ -0.14
TRA2B-212ENST00000480461 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
TRA2B-212ENST00000480461 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 PNMA6FA0A0J9YX94 578 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 ZBTB5O15062 677 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 PPP2R5BQ15173 497 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 PKN1Q16512 942 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 NECAB2Q7Z6G3 386 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 PHKBQ93100 1093 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
TRA2B-212ENST00000480461 A0A0G2JMZ2 1700 aa14.18□□□□□ -0.14
TRA2B-212ENST00000480461 SMCHD1A6NHR9 2005 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 OPLAHO14841 1288 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
TRA2B-212ENST00000480461 ALAS1P13196 640 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 IFNAR1P17181 557 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 GPR142Q7Z601 462 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 NCAPG2Q86XI2 1143 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 USP6NLQ92738 828 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 COA7Q96BR5 231 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
TRA2B-212ENST00000480461 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
TRA2B-212ENST00000480461 COL11A1P12107 1806 aaPredicted RBP14.16□□□□□ -0.14
TRA2B-212ENST00000480461 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
TRA2B-212ENST00000480461 NFIBO00712 420 aa14.16□□□□□ -0.14
TRA2B-212ENST00000480461 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
TRA2B-212ENST00000480461 PRPF3O43395 683 aaKnown RBP14.16□□□□□ -0.14
TRA2B-212ENST00000480461 SLC25A27O95847 323 aa14.16□□□□□ -0.14
TRA2B-212ENST00000480461 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
TRA2B-212ENST00000480461 PTPREP23469 700 aa14.16□□□□□ -0.14
TRA2B-212ENST00000480461 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms