RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 GREB1LQ9C091 1923 aaPredicted RBP8.4□□□□□ -1.06
COL17A1-205ENST00000480127 IGKV6D-41A0A0C4DH26 115 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 RANBP6O60518 1105 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 TTLL1O95922 423 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 MYOGP15173 224 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 PTGS1P23219 599 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 CCL23P55773 120 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 RRP1P56182 461 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 CNTN2Q02246 1040 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 SBK1Q52WX2 424 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 RRP12Q5JTH9 1297 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 CHST13Q8NET6 341 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 NOC4LQ9BVI4 516 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 WNT8AQ9H1J5 351 aa8.39□□□□□ -1.07
COL17A1-205ENST00000480127 MTIF3Q9H2K0 278 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
COL17A1-205ENST00000480127 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 PATL2C9JE40 543 aaKnown RBP8.38□□□□□ -1.07
COL17A1-205ENST00000480127 M0R2C6 588 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 B4GALT4O60513 344 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 CABYRO75952 493 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
COL17A1-205ENST00000480127 SLC1A4P43007 532 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 KCNQ1P51787 676 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 OAZ1P54368 228 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 TFAP4Q01664 338 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 TNFAIP2Q03169 654 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 ITGA7Q13683 1181 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 MKL1Q969V6 931 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 RILPL2Q969X0 211 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 C1QTNF1Q9BXJ1 281 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 TRPV6Q9H1D0 765 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
COL17A1-205ENST00000480127 FBXO40Q9UH90 709 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 PCDHA11Q9Y5I1 949 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 DDX49Q9Y6V7 483 aaKnown RBP8.38□□□□□ -1.07
COL17A1-205ENST00000480127 GBF1Q92538 1859 aa8.38□□□□□ -1.07
COL17A1-205ENST00000480127 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 MYH7P12883 1935 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 TMEM232C9JQI7 657 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 RFXAPO00287 272 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 DYNC1LI2O43237 492 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 SMPD1P17405 629 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 POU3F3P20264 500 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 STAT2P52630 851 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 PSMC6P62333 389 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 PPARAQ07869 468 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 SLFN13Q68D06 897 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 TAPT1Q6NXT6 567 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 TLK2Q86UE8 772 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 RPUSD2Q8IZ73 545 aaKnown RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 GMCL1P1Q8NEA9 526 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 CHURC1Q8WUH1 139 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 CEP95Q96GE4 821 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 SCLYQ96I15 445 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 CRBNQ96SW2 442 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 SEZ6LQ9BYH1 1024 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 RWDD1Q9H446 243 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 EPHX3Q9H6B9 360 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 A1CFQ9NQ94 594 aaKnown RBP8.37□□□□□ -1.07
COL17A1-205ENST00000480127 PDGFCQ9NRA1 345 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 MTMR4Q9NYA4 1195 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 FEM1BQ9UK73 627 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 SLC4A7Q9Y6M7 1214 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 MCM3APO60318 1980 aa8.37□□□□□ -1.07
COL17A1-205ENST00000480127 ZNF536O15090 1300 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 EPOPA6NHQ4 379 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 BMP3P12645 472 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 ATP2A2P16615 1042 aaKnown RBP8.36□□□□□ -1.07
COL17A1-205ENST00000480127 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 AAK1Q2M2I8 961 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 EVI5LQ96CN4 794 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 LRFN3Q9BTN0 628 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 ALDH8A1Q9H2A2 487 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-205ENST00000480127 ACAD9Q9H845 621 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 DIAPH3Q9NSV4 1193 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 SYNPO2Q9UMS6 1093 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 Q9Y3F1 56 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
COL17A1-205ENST00000480127 TCF20Q9UGU0 1960 aaKnown RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 LRRC37A2A6NM11 1700 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ASB14A6NK59 587 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms