RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 WDR18Q9BV38 432 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 RANBP17Q9H2T7 1088 aaKnown RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 NEMFO60524 1076 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 FDX1P10109 184 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 ZNF165P49910 485 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 NLRP12P59046 1061 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 MDM2Q00987 491 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 FEZ1Q99689 392 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 CCSER1Q9C0I3 900 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 GGA3Q9NZ52 723 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 RNF181Q9P0P0 153 aa12.5□□□□□ -0.41
VTI1A-204ENST00000480057 ASTN2O75129 1339 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-204ENST00000480057 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
VTI1A-204ENST00000480057 SLC26A4O43511 780 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 CCNT1O60563 726 aaKnown RBP12.49□□□□□ -0.41
VTI1A-204ENST00000480057 EPS15P42566 896 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 USP11P51784 963 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 POSTNQ15063 836 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 IL17AQ16552 155 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 CT47A1Q5JQC4 288 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-204ENST00000480057 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-204ENST00000480057 IQUBQ8NA54 791 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-204ENST00000480057 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 TMEM260Q9NX78 707 aa12.49□□□□□ -0.41
VTI1A-204ENST00000480057 ABCB11O95342 1321 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SMC2O95347 1197 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 MYL1P05976 194 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
VTI1A-204ENST00000480057 CYP3A7P24462 503 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SARSP49591 514 aaKnown RBP12.48□□□□□ -0.41
VTI1A-204ENST00000480057 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
VTI1A-204ENST00000480057 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
VTI1A-204ENST00000480057 IQCB1Q15051 598 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 E2F4Q16254 413 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 USP49Q70CQ1 688 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SPICE1Q8N0Z3 855 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SPATA20Q8TB22 786 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 EPSTI1Q96J88 318 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 CUEDC2Q9H467 287 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 SERTAD1Q9UHV2 236 aa12.48□□□□□ -0.41
VTI1A-204ENST00000480057 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
VTI1A-204ENST00000480057 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 MEIS2O14770 477 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
VTI1A-204ENST00000480057 PDIA5Q14554 519 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 CALCRLQ16602 461 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 UBE2SQ16763 222 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 C9orf131Q5VYM1 1079 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
VTI1A-204ENST00000480057 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
VTI1A-204ENST00000480057 CRYGNQ8WXF5 182 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 DHX58Q96C10 678 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 PICK1Q9NRD5 415 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
VTI1A-204ENST00000480057 A0A087X0B3 334 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SPDYE3A6NKU9 549 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 GOLGA6L19H0YKK7 550 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 TBX3O15119 743 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 EDIL3O43854 480 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 INPP5BP32019 993 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SREBF1P36956 1147 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 UBA7P41226 1012 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms