RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 VTI1AQ96AJ9 217 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 RNPC3Q96LT9 517 aaKnown RBP7.88□□□□□ -1.15
FN1-220ENST00000480024 GLT1D1Q96MS3 346 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 GUCD1Q96NT3 240 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 TMEM47Q9BQJ4 181 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 KATNBL1Q9H079 304 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 UPF3AQ9H1J1 476 aaKnown RBP7.88□□□□□ -1.15
FN1-220ENST00000480024 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 CYP39A1Q9NYL5 469 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
FN1-220ENST00000480024 A0A0U1RQG5 324 aaPredicted RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 ASB14A6NK59 587 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 NFIBO00712 420 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 PLA2G6O60733 806 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 ICAM1P05362 532 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 FGRP09769 529 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 TOP1P11387 765 aaKnown RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 NOVP48745 357 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 GJA9P57773 515 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 TNFAIP2Q03169 654 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 FAAP100Q0VG06 881 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 SYDE2Q5VT97 1194 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 SLC30A10Q6XR72 485 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 ANKRD33Q7Z3H0 272 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 CHD1LQ86WJ1 897 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 SMC5Q8IY18 1101 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 RANBP17Q9H2T7 1088 aaKnown RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 RWDD1Q9H446 243 aaPredicted RBP7.87□□□□□ -1.15
FN1-220ENST00000480024 DIAPH3Q9NSV4 1193 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 TBX21Q9UL17 535 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 MYH6P13533 1939 aa7.87□□□□□ -1.15
FN1-220ENST00000480024 ELP1O95163 1332 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 MROH7Q68CQ1 1323 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 MYO9BQ13459 2157 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 UNC80Q8N2C7 3258 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 CTAGE5O15320 804 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 IGHDP01880 384 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 PDHBP11177 359 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 SMPD1P17405 629 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 SDSP20132 328 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 MFAP1P55081 439 aaKnown RBP7.86□□□□□ -1.15
FN1-220ENST00000480024 SMAD3P84022 425 aaKnown RBP7.86□□□□□ -1.15
FN1-220ENST00000480024 NUCB1Q02818 461 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 AAMPQ13685 434 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 BAATQ14032 418 aaPredicted RBP7.86□□□□□ -1.15
FN1-220ENST00000480024 AKNAD1Q5T1N1 836 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 FAM109BQ6ICB4 259 aaPredicted RBP7.86□□□□□ -1.15
FN1-220ENST00000480024 CWC27Q6UX04 472 aaKnown RBP7.86□□□□□ -1.15
FN1-220ENST00000480024 CXCL17Q6UXB2 119 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 MFSD6Q6ZSS7 791 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 EXOC6Q8TAG9 804 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 TOX2Q96NM4 488 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 ZKSCAN3Q9BRR0 538 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 PPP1R12CQ9BZL4 782 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 AP5M1Q9H0R1 490 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 PDGFCQ9NRA1 345 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 TTC28Q96AY4 2481 aa7.86□□□□□ -1.15
FN1-220ENST00000480024 ARVCFO00192 962 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 DLL1O00548 723 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 TLR3O15455 904 aaKnown RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 DYNC1LI2O43237 492 aaPredicted RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 TIMP1P01033 207 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 GOLGA8HP0CJ92 632 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 CALML3P27482 149 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 CDK7P50613 346 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 ALDH5A1P51649 535 aaPredicted RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 ZNF543Q08ER8 600 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 FSCN1Q16658 493 aaKnown RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 TMEM63BQ5T3F8 832 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 BTNL9Q6UXG8 535 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 TICAM2Q86XR7 235 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 FAM126BQ8IXS8 530 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 ESR2Q92731 530 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 CDX2Q99626 313 aaPredicted RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 TTYH1Q9H313 450 aaPredicted RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 CPVLQ9H3G5 476 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 RNF41Q9H4P4 317 aaPredicted RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 VTA1Q9NP79 307 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
FN1-220ENST00000480024 GNEQ9Y223 722 aaKnown RBP7.85□□□□□ -1.15
FN1-220ENST00000480024 EYSQ5T1H1 3165 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 CDH23Q9H251 3354 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 GBF1Q92538 1859 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 ZNF213O14771 459 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 ZEB2O60315 1214 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 KDM4AO75164 1064 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 PCP11498 1178 aaKnown RBP7.84□□□□□ -1.15
FN1-220ENST00000480024 CSF2RAP15509 400 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 PSMC6P62333 389 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 NKX3-2P78367 333 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 PPIGQ13427 754 aaKnown RBP eCLIP7.84□□□□□ -1.15
FN1-220ENST00000480024 USH1GQ495M9 461 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 MFSD5Q6N075 450 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 TAPT1Q6NXT6 567 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 RNF207Q6ZRF8 634 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 KIAA1211Q6ZU35 1233 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms