RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
COMMD3-212ENST00000479958 A0A1W2PQJ5 194 aa8.39□□□□□ -1.07
COMMD3-212ENST00000479958 ANKRD34BA5PLL1 514 aa8.39□□□□□ -1.07
COMMD3-212ENST00000479958 EPHX1P07099 455 aa8.39□□□□□ -1.07
COMMD3-212ENST00000479958 NCAPHQ15003 741 aa8.39□□□□□ -1.07
COMMD3-212ENST00000479958 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
COMMD3-212ENST00000479958 RCC1LQ96I51 464 aaKnown RBP8.39□□□□□ -1.07
COMMD3-212ENST00000479958 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 FGF10O15520 208 aaPredicted RBP8.38□□□□□ -1.07
COMMD3-212ENST00000479958 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 DLG4P78352 724 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 SRSF3P84103 164 aaKnown RBP8.38□□□□□ -1.07
COMMD3-212ENST00000479958 TNNI3KQ59H18 835 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 ARHGEF39Q8N4T4 335 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 KLHL6Q8WZ60 621 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 JMJD8Q96S16 334 aa8.38□□□□□ -1.07
COMMD3-212ENST00000479958 SMG5Q9UPR3 1016 aaKnown RBP8.38□□□□□ -1.07
COMMD3-212ENST00000479958 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 KRT1P04264 644 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-212ENST00000479958 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
COMMD3-212ENST00000479958 AMPD2Q01433 879 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 KCNA10Q16322 511 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 EEF1DP3Q658K8 133 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 CRACR2BQ8N4Y2 399 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-212ENST00000479958 FAM169BQ8N8A8 192 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 PTCHD1Q96NR3 888 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
COMMD3-212ENST00000479958 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 NOP56O00567 594 aaKnown RBP8.37□□□□□ -1.07
COMMD3-212ENST00000479958 SEPHS1P49903 392 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 ARID5AQ03989 594 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 GRB10Q13322 594 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 POMZP3Q6PJE2 187 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 AKT3Q9Y243 479 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 MRVI1Q9Y6F6 885 aa8.37□□□□□ -1.07
COMMD3-212ENST00000479958 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 E9PSI1 815 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 VAMP4O75379 141 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 EFEMP2O95967 443 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 IFNGR1P15260 489 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 CFPP27918 469 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 YBX1P67809 324 aaKnown RBP8.36□□□□□ -1.07
COMMD3-212ENST00000479958 RAB3GAP1Q15042 981 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 RCSD1Q6JBY9 416 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 LRRC56Q8IYG6 542 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-212ENST00000479958 CD320Q9NPF0 282 aa8.36□□□□□ -1.07
COMMD3-212ENST00000479958 CGGBP1Q9UFW8 167 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-212ENST00000479958 AURKAO14965 403 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
COMMD3-212ENST00000479958 L1CAMP32004 1257 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 NR1I3Q14994 352 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 DPY19L1Q2PZI1 675 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 ACTR10Q9NZ32 417 aa8.35□□□□□ -1.07
COMMD3-212ENST00000479958 TRBV23OR9-2A0A075B6M9 112 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 C2orf71A6NGG8 1288 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 SDHBP21912 280 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 CORO7P57737 925 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 MVKQ03426 396 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 KIR3DS1Q14943 382 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 SIAH1Q8IUQ4 282 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 PDLIM7Q9NR12 457 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 PODXL2Q9NZ53 605 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 PRKAG3Q9UGI9 489 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 CNOT6Q9ULM6 557 aaKnown RBP8.34□□□□□ -1.07
COMMD3-212ENST00000479958 R3HCC1Q9Y3T6 440 aaKnown RBP8.34□□□□□ -1.07
COMMD3-212ENST00000479958 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
COMMD3-212ENST00000479958 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 VIPR1P32241 457 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 CEBPAP49715 358 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-212ENST00000479958 BVESQ8NE79 360 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 PPP1R14AQ96A00 147 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 SGPP1Q9BX95 441 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 SUSD2Q9UGT4 822 aa8.33□□□□□ -1.08
COMMD3-212ENST00000479958 NUDT19A8MXV4 375 aa8.32□□□□□ -1.08
COMMD3-212ENST00000479958 CBX2Q14781 532 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-212ENST00000479958 FXNQ16595 210 aa8.32□□□□□ -1.08
COMMD3-212ENST00000479958 ZNF385BQ569K4 471 aa8.32□□□□□ -1.08
COMMD3-212ENST00000479958 LARP1BQ659C4 914 aaKnown RBP8.32□□□□□ -1.08
COMMD3-212ENST00000479958 CILP2Q8IUL8 1156 aa8.32□□□□□ -1.08
COMMD3-212ENST00000479958 KLHL14Q9P2G3 628 aa8.32□□□□□ -1.08
COMMD3-212ENST00000479958 STXBP3O00186 592 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 RFXAPO00287 272 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 NUAK1O60285 661 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 PAMP19021 973 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 LINC00310P59036 64 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 BICRALQ6AI39 1079 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 SLC43A3Q8NBI5 491 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 TNFRSF12AQ9NP84 129 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 EMC9Q9Y3B6 208 aa8.31□□□□□ -1.08
COMMD3-212ENST00000479958 DDAH1O94760 285 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 KCNH1O95259 989 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 DNAJA1P31689 397 aaKnown RBP8.3□□□□□ -1.08
COMMD3-212ENST00000479958 ETFBP38117 255 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 PAQR3Q6TCH7 311 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 FAM178BQ8IXR5 827 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms