RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 ZBED4O75132 1171 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 ICAM1P05362 532 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 ME1P48163 572 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 SNAP25P60880 206 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 COG2Q14746 738 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 PTPAQ15257 358 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 USH1GQ495M9 461 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 TTC38Q5R3I4 469 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 GPT2Q8TD30 523 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 OPTNQ96CV9 577 aa13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 MRPL11Q9Y3B7 192 aaKnown RBP13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
TM9SF4-206ENST00000479591 RLFQ13129 1914 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 PIK3CDO00329 1044 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 IRF6O14896 467 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 DSG3P32926 999 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 OAZ1P54368 228 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 AP3B2Q13367 1082 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 ADALQ6DHV7 355 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 SLC10A4Q96EP9 437 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 PGBD1Q96JS3 809 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 BIN2Q9UBW5 565 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 PCDHB6Q9Y5E3 794 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 TRPM7Q96QT4 1865 aa13.65□□□□□ -0.22
TM9SF4-206ENST00000479591 A0A1W2PQ27 194 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 A0A1W2PQ64 194 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 VWA5AO00534 786 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 FOSP01100 380 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 ATP2B1P20020 1258 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 INF2Q27J81 1249 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 NOM1Q5C9Z4 860 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 FASTKD5Q7L8L6 764 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 NEK8Q86SG6 692 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 CCPG1Q9ULG6 757 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 ZNF536O15090 1300 aa13.64□□□□□ -0.23
TM9SF4-206ENST00000479591 MEIS2O14770 477 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 CUTAO60888 179 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 FMR1Q06787 632 aaKnown RBP eCLIP13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 UBE2SQ16763 222 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 ATG4CQ96DT6 458 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
TM9SF4-206ENST00000479591 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 LAD1O00515 517 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 ATP2A1O14983 1001 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 ATP2C1P98194 919 aaPredicted RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 ZNF174Q15697 407 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 REPS2Q8NFH8 660 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 FERMT2Q96AC1 680 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 AGBL1Q96MI9 1066 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 MAF1Q9H063 256 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 MAP3K20Q9NYL2 800 aaKnown RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 RBBP6Q7Z6E9 1792 aaKnown RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
TM9SF4-206ENST00000479591 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 OPLAHO14841 1288 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 PTPREP23469 700 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 CMA1P23946 247 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 GHRHRQ02643 423 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 PTGDRQ13258 359 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 LETM2Q2VYF4 491 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 TKFCQ3LXA3 575 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 AXDND1Q5T1B0 1012 aaPredicted RBP13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 ARL6IP4Q66PJ3 421 aaKnown RBP13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
TM9SF4-206ENST00000479591 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms