RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ZNF467Q7Z7K2 595 aaPredicted RBP20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 FBXO16Q8IX29 292 aaPredicted RBP20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 MSL3Q8N5Y2 521 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 DEFB123Q8N688 67 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 FAM161BQ96MY7 647 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 ABHD16BQ9H3Z7 469 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 CYP39A1Q9NYL5 469 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 ZNF213O14771 459 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 PLA2G6O60733 806 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 KDM4AO75164 1064 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 FDX1P10109 184 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 SHHQ15465 462 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 LRIT3Q3SXY7 679 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 VTI1AQ96AJ9 217 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 STARD7Q9NQZ5 370 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 DUSP11O75319 330 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 ICAM1P05362 532 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 ASGR1P07306 291 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 BAATQ14032 418 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 CCSAPQ6IQ19 270 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 SLC30A10Q6XR72 485 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 UBA5Q9GZZ9 404 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 TCP11L1Q9NUJ3 509 aa20.46■□□□□ 0.87
ECHDC1-216ENST00000479525 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 CLTBP09497 229 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 EPHB4P54760 987 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 TKFCQ3LXA3 575 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 USH1GQ495M9 461 aa20.45■□□□□ 0.86
ECHDC1-216ENST00000479525 CTAGE5O15320 804 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 CALML3P27482 149 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 TNFAIP2Q03169 654 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 GNASQ5JWF2 1037 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 BTNL9Q6UXG8 535 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 ESR2Q92731 530 aa20.44■□□□□ 0.86
ECHDC1-216ENST00000479525 FAAP100Q0VG06 881 aa20.43■□□□□ 0.86
ECHDC1-216ENST00000479525 TTC22Q5TAA0 569 aa20.43■□□□□ 0.86
ECHDC1-216ENST00000479525 RNF41Q9H4P4 317 aaPredicted RBP20.43■□□□□ 0.86
ECHDC1-216ENST00000479525 TMEM39AQ9NV64 488 aa20.43■□□□□ 0.86
ECHDC1-216ENST00000479525 SMPD1P17405 629 aa20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 GJA9P57773 515 aa20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 TLK2Q86UE8 772 aa20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 PPP1R13LQ8WUF5 828 aa20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 TSEN34Q9BSV6 310 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 UPF3AQ9H1J1 476 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-216ENST00000479525 ASB14A6NK59 587 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 DYNC1LI2O43237 492 aaPredicted RBP20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 RAG1P15918 1043 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 C1orf53Q5VUE5 145 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 TAPT1Q6NXT6 567 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 CXCL17Q6UXB2 119 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 ZSWIM5Q9P217 1185 aa20.41■□□□□ 0.86
ECHDC1-216ENST00000479525 MOXD2PA6NHM9 499 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 SNHG28P0DPA3 235 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 ALDH5A1P51649 535 aaPredicted RBP20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 ENAHQ8N8S7 591 aaPredicted RBP20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 TBC1D5Q92609 795 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 GLT1D1Q96MS3 346 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 PPP1R12CQ9BZL4 782 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 SPC25Q9HBM1 224 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 GNEQ9Y223 722 aaKnown RBP20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 TAF6LQ9Y6J9 622 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 TNKSO95271 1327 aa20.4■□□□□ 0.86
ECHDC1-216ENST00000479525 HIP1O00291 1037 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 CST5P28325 142 aaPredicted RBP20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 PSMC6P62333 389 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 PTH1RQ03431 593 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 IMMTQ16891 758 aaKnown RBP20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 CYB5R4Q7L1T6 521 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 SKAP1Q86WV1 359 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 TICAM2Q86XR7 235 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 TTC14Q96N46 770 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 ZSCAN10Q96SZ4 725 aaPredicted RBP20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 VAT1LQ9HCJ6 419 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 MTMR10Q9NXD2 777 aa20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.85
ECHDC1-216ENST00000479525 EYSQ5T1H1 3165 aa20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 DCDC2CA8MYV0 355 aa20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 RBAK-RBAKDNI3L0D1 243 aa20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 IQCA1Q86XH1 822 aa20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 GBF1Q92538 1859 aa20.38■□□□□ 0.85
ECHDC1-216ENST00000479525 KIAA0355O15063 1070 aa20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 PCP11498 1178 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 RPS6P62753 249 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 CDC37Q16543 378 aaPredicted RBP20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 FSCN1Q16658 493 aaKnown RBP20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 ANKRD33Q7Z3H0 272 aa20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 COPS5Q92905 334 aa20.37■□□□□ 0.85
ECHDC1-216ENST00000479525 KIAA1217Q5T5P2 1943 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms