RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 MSL3Q8N5Y2 521 aaKnown RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 FAM122AQ96E09 287 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 CCDC17Q96LX7 622 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 GLT1D1Q96MS3 346 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 NOC4LQ9BVI4 516 aaKnown RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 TEX13BQ9BXU2 312 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 TRPV6Q9H1D0 765 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 EPHX3Q9H6B9 360 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 KANSL2Q9H9L4 492 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 C11orf16Q9NQ32 467 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 ECHDC1Q9NTX5 307 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 PIEZO1Q92508 2521 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 LCTP09848 1927 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 ATP2A1O14983 1001 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 ERC2O15083 957 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 SMARCA5O60264 1052 aaPredicted RBP7.92□□□□□ -1.14
VCP-205ENST00000479300 NDUFB10O96000 172 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 RASA1P20936 1047 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 CCL23P55773 120 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 CNTN2Q02246 1040 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 UBE3CQ15386 1083 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 RAB30Q15771 203 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 GNASQ5JWF2 1037 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 CTR9Q6PD62 1173 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 CXCL17Q6UXB2 119 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 ARMCX2Q7L311 632 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 SPRED2Q7Z698 418 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 CCDC144CPQ8IYA2 1237 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 SLF1Q9BQI6 1058 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 LRFN3Q9BTN0 628 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 RAVER2Q9HCJ3 691 aaKnown RBP7.92□□□□□ -1.14
VCP-205ENST00000479300 MSRAQ9UJ68 235 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 SLC4A4Q9Y6R1 1079 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 MROH7Q68CQ1 1323 aa7.92□□□□□ -1.14
VCP-205ENST00000479300 IGKV6D-41A0A0C4DH26 115 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SOWAHBA6NEL2 793 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 F5H6K3 240 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 RAD21O60216 631 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 B4GALT4O60513 344 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 FGBP02675 491 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 ZFYP08048 801 aaPredicted RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 COPB2P35606 906 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 PSMC6P62333 389 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 KLRC3Q07444 240 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 TTLL4Q14679 1199 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 CPXCR1Q8N123 301 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 MICALL1Q8N3F8 863 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 FAM133AQ8N9E0 248 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 PCSK9Q8NBP7 692 aaKnown RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 VTI1AQ96AJ9 217 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 DDX11Q96FC9 970 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SCLYQ96I15 445 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 PUS7LQ9H0K6 701 aaKnown RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 TSPYL2Q9H2G4 693 aaPredicted RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 ABHD16BQ9H3Z7 469 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 HIPK3Q9H422 1215 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 DCTPP1Q9H773 170 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SLC28A3Q9HAS3 691 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SLC38A10Q9HBR0 1119 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 ZNF287Q9HBT7 754 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 GNEQ9Y223 722 aaKnown RBP7.91□□□□□ -1.14
VCP-205ENST00000479300 MTCH2Q9Y6C9 303 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 SCN5AQ14524 2016 aa7.91□□□□□ -1.14
VCP-205ENST00000479300 MUC6Q6W4X9 2439 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 PTPRSQ13332 1948 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 ZNF536O15090 1300 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 TLL1O43897 1013 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 APPP05067 770 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 SMPD1P17405 629 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 GNAT2P19087 354 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 POU3F3P20264 500 aaPredicted RBP7.9□□□□□ -1.14
VCP-205ENST00000479300 PPP2R2DQ66LE6 453 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 CCDC174Q6PII3 467 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 STK11IPQ8N1F8 1099 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 PRPF38AQ8NAV1 312 aaKnown RBP7.9□□□□□ -1.14
VCP-205ENST00000479300 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 CERS4Q9HA82 394 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 CD320Q9NPF0 282 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 PDGFCQ9NRA1 345 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 NYAP2Q9P242 653 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 ARPP21Q9UBL0 812 aaPredicted RBP7.9□□□□□ -1.14
VCP-205ENST00000479300 CTDP1Q9Y5B0 961 aaPredicted RBP7.9□□□□□ -1.14
VCP-205ENST00000479300 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
VCP-205ENST00000479300 BRWD1Q9NSI6 2320 aa7.9□□□□□ -1.15
VCP-205ENST00000479300 MYH4Q9Y623 1939 aa7.9□□□□□ -1.15
VCP-205ENST00000479300 COL4A4P53420 1690 aaPredicted RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 TTC41PQ6P2S7 1318 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 GSG1L2A8MUP6 293 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 MINDY4BA8MYZ0 360 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 RNF113AO15541 343 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 CA3P07451 260 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 SLC3A2P08195 630 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 TDO2P48775 406 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 RRP1P56182 461 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms