RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 VTI1AQ96AJ9 217 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 GLT1D1Q96MS3 346 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 UPF3AQ9H1J1 476 aaKnown RBP19.58■□□□□ 0.72
PHF1-207ENST00000479029 RANBP17Q9H2T7 1088 aaKnown RBP19.58■□□□□ 0.72
PHF1-207ENST00000479029 GPCPD1Q9NPB8 672 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 TMEM39AQ9NV64 488 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 CYP39A1Q9NYL5 469 aa19.58■□□□□ 0.72
PHF1-207ENST00000479029 ELP1O95163 1332 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 FRMPD2Q68DX3 1309 aaPredicted RBP19.57■□□□□ 0.72
PHF1-207ENST00000479029 MYADML2A6NDP7 307 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 ZNF213O14771 459 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 KIAA0355O15063 1070 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 ADCY6O43306 1168 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 TNFAIP2Q03169 654 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 SHHQ15465 462 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 PNMA2Q9UL42 364 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 COL6A3P12111 3177 aa19.57■□□□□ 0.72
PHF1-207ENST00000479029 ASGR1P07306 291 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 PDHBP11177 359 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 RAG1P15918 1043 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 NT5C2P49902 561 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 MTMR10Q9NXD2 777 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 A0A0C4DFX4 3053 aa19.56■□□□□ 0.72
PHF1-207ENST00000479029 ITGB8P26012 769 aa19.55■□□□□ 0.72
PHF1-207ENST00000479029 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
PHF1-207ENST00000479029 FAAP100Q0VG06 881 aa19.55■□□□□ 0.72
PHF1-207ENST00000479029 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
PHF1-207ENST00000479029 FAM109BQ6ICB4 259 aaPredicted RBP19.55■□□□□ 0.72
PHF1-207ENST00000479029 MROH7Q68CQ1 1323 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 NKX3-2P78367 333 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 ZNF543Q08ER8 600 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 BAATQ14032 418 aaPredicted RBP19.54■□□□□ 0.72
PHF1-207ENST00000479029 CCDC178Q5BJE1 867 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 IQSEC1Q6DN90 963 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 AP5M1Q9H0R1 490 aa19.54■□□□□ 0.72
PHF1-207ENST00000479029 ADD3Q9UEY8 706 aaKnown RBP19.54■□□□□ 0.72
PHF1-207ENST00000479029 ASTN1O14525 1302 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 NEDD4P46934 1319 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
PHF1-207ENST00000479029 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.53■□□□□ 0.72
PHF1-207ENST00000479029 SNHG28P0DPA3 235 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 CDK7P50613 346 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 EEPD1Q7L9B9 569 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 IQCA1Q86XH1 822 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 SLC17A8Q8NDX2 589 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 ZKSCAN3Q9BRR0 538 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 CTNNA3Q9UI47 895 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 GNEQ9Y223 722 aaKnown RBP19.53■□□□□ 0.72
PHF1-207ENST00000479029 STXBP5LQ9Y2K9 1186 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
PHF1-207ENST00000479029 MCM3APO60318 1980 aa19.53■□□□□ 0.72
PHF1-207ENST00000479029 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 ARVCFO00192 962 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 NFIBO00712 420 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 CTAGE5O15320 804 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 KDM4AO75164 1064 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 SMPD1P17405 629 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 BEX3Q00994 111 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 FPGSQ05932 587 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 IMMTQ16891 758 aaKnown RBP19.52■□□□□ 0.72
PHF1-207ENST00000479029 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
PHF1-207ENST00000479029 TLK2Q86UE8 772 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 MORC4Q8TE76 937 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 PURBQ96QR8 312 aaKnown RBP19.52■□□□□ 0.72
PHF1-207ENST00000479029 DSCC1Q9BVC3 393 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 PDGFCQ9NRA1 345 aa19.52■□□□□ 0.72
PHF1-207ENST00000479029 DDX49Q9Y6V7 483 aaKnown RBP19.52■□□□□ 0.72
PHF1-207ENST00000479029 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 LOC102724159A0A0B4J2E5 919 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 DYNC1LI2O43237 492 aaPredicted RBP19.51■□□□□ 0.71
PHF1-207ENST00000479029 ZEB2O60315 1214 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 CABYRO75952 493 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 TIMP1P01033 207 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 PWP2Q15269 919 aaKnown RBP19.51■□□□□ 0.71
PHF1-207ENST00000479029 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
PHF1-207ENST00000479029 TAPT1Q6NXT6 567 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
PHF1-207ENST00000479029 Q9Y3F1 56 aa19.51■□□□□ 0.71
PHF1-207ENST00000479029 CALML3P27482 149 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 ZNF697Q5TEC3 545 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 CXCL17Q6UXB2 119 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 RNF207Q6ZRF8 634 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 KIAA1211Q6ZU35 1233 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 PNMA1Q8ND90 353 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 ZSCAN10Q96SZ4 725 aaPredicted RBP19.5■□□□□ 0.71
PHF1-207ENST00000479029 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 TBX21Q9UL17 535 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 WDR19Q8NEZ3 1342 aa19.5■□□□□ 0.71
PHF1-207ENST00000479029 CUL9Q8IWT3 2517 aa19.49■□□□□ 0.71
PHF1-207ENST00000479029 B4E1Z4 1266 aa19.49■□□□□ 0.71
PHF1-207ENST00000479029 TLR3O15455 904 aaKnown RBP19.49■□□□□ 0.71
PHF1-207ENST00000479029 GOLGA8HP0CJ92 632 aa19.49■□□□□ 0.71
PHF1-207ENST00000479029 ALDH5A1P51649 535 aaPredicted RBP19.49■□□□□ 0.71
PHF1-207ENST00000479029 EPHB4P54760 987 aa19.49■□□□□ 0.71
PHF1-207ENST00000479029 SMAD3P84022 425 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms