RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 USP4Q13107 963 aa23.51■■□□□ 1.35
SDF4-206ENST00000478938 ODF2Q5BJF6 829 aa23.51■■□□□ 1.35
SDF4-206ENST00000478938 AGPAT5Q9NUQ2 364 aa23.51■■□□□ 1.35
SDF4-206ENST00000478938 DENND2AQ9ULE3 1009 aa23.51■■□□□ 1.35
SDF4-206ENST00000478938 COQ9O75208 318 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 RRAGBQ5VZM2 374 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 CHADLQ6NUI6 762 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 PIDD1Q9HB75 910 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 SENP2Q9HC62 589 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 CAPN11Q9UMQ6 739 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 SLC12A4Q9UP95 1085 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 HYOU1Q9Y4L1 999 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 MYH13Q9UKX3 1938 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 RANBP6O60518 1105 aaKnown RBP23.5■■□□□ 1.35
SDF4-206ENST00000478938 MAP3K12Q12852 859 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 AIMP1Q12904 312 aaKnown RBP23.5■■□□□ 1.35
SDF4-206ENST00000478938 FAM133BQ5BKY9 247 aaKnown RBP23.5■■□□□ 1.35
SDF4-206ENST00000478938 MICU3Q86XE3 530 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 ALS2CR12Q96Q35 445 aa23.5■■□□□ 1.35
SDF4-206ENST00000478938 ZNF263O14978 683 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 TACC1O75410 805 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 PAFAH1B1P43034 410 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 RALYLQ86SE5 291 aaKnown RBP23.49■■□□□ 1.35
SDF4-206ENST00000478938 ERICH1Q86X53 443 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 MB21D1Q8N884 522 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 NKX2-3Q8TAU0 364 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 TSGA10Q9BZW7 698 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 MYH10P35580 1976 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 UTYO14607 1347 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 DPPA5A6NC42 116 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 B4DLN1 442 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 FOXP2O15409 715 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 SPAG1Q07617 926 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 MEA1Q16626 185 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 LGR6Q9HBX8 967 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 MAPK8IP1Q9UQF2 711 aa23.49■■□□□ 1.35
SDF4-206ENST00000478938 DCDC2CA8MYV0 355 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 ACEP12821 1306 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 KCNJ2P63252 427 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 IMMTQ16891 758 aaKnown RBP23.48■■□□□ 1.35
SDF4-206ENST00000478938 BLZF1Q9H2G9 400 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 KCNJ14Q9UNX9 436 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 USP31Q70CQ4 1352 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 EVI5O60447 810 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 HOXB7P09629 217 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 TCP1P17987 556 aaKnown RBP23.48■■□□□ 1.35
SDF4-206ENST00000478938 PPP2R2AP63151 447 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 SPATA21Q7Z572 469 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
SDF4-206ENST00000478938 TMX4Q9H1E5 349 aaPredicted RBP23.48■■□□□ 1.35
SDF4-206ENST00000478938 RGL1Q9NZL6 768 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 SRPRBQ9Y5M8 271 aaKnown RBP23.48■■□□□ 1.35
SDF4-206ENST00000478938 BCL9LQ86UU0 1499 aa23.48■■□□□ 1.35
SDF4-206ENST00000478938 ZPR1O75312 459 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 CDKL5O76039 1030 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ARMC9Q7Z3E5 817 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 SH3RF1Q7Z6J0 888 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ZNF579Q8NAF0 562 aaKnown RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 NCOA7Q8NI08 942 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 GSDMAQ96QA5 445 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 AGAP1Q9UPQ3 857 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ECM29Q5VYK3 1845 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 A8MUI8 341 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 IARSP41252 1262 aaKnown RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 GCLCP48506 637 aaPredicted RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 ANKRD20A2Q5SQ80 823 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ANKRD20A1Q5TYW2 823 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ANKRD20A3Q5VUR7 823 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 CCDC197Q8NCU1 140 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 NELFBQ8WX92 580 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 MYL10Q9BUA6 226 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 SPDYE5A6NIY4 337 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ORC4O43929 436 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 PRLRP16471 622 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 KLK7P49862 253 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 PTPN12Q05209 780 aaKnown RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 PAK1Q13153 545 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 ZNF268Q14587 947 aaPredicted RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 DIS3L2Q8IYB7 885 aaKnown RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 KCNV2Q8TDN2 545 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 KCNMB3Q9NPA1 279 aa23.47■■□□□ 1.35
SDF4-206ENST00000478938 CHCHD3Q9NX63 227 aaKnown RBP23.47■■□□□ 1.35
SDF4-206ENST00000478938 NWD2Q9ULI1 1742 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 CPDO75976 1380 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 IFIT3O14879 490 aaKnown RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 RNF8O76064 485 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 HSD17B3P37058 310 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 HSPA9P38646 679 aaKnown RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 ALDH5A1P51649 535 aaPredicted RBP23.46■■□□□ 1.35
SDF4-206ENST00000478938 ZNF844Q08AG5 666 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 TRIM68Q6AZZ1 485 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 SH2D4AQ9H788 454 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 PLCB1Q9NQ66 1216 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 RWDD2AQ9UIY3 292 aa23.46■■□□□ 1.35
SDF4-206ENST00000478938 NALCNQ8IZF0 1738 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms