RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PDLIM7Q9NR12 457 aa5.74□□□□□ -1.49
VLDLR-204ENST00000478776 F8W031 263 aaPredicted RBP5.73□□□□□ -1.49
VLDLR-204ENST00000478776 TBC1D8O95759 1140 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 DBHP09172 617 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 MSL3P1P0C860 447 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 IGFBP6P24592 240 aaPredicted RBP5.73□□□□□ -1.49
VLDLR-204ENST00000478776 FOXO4P98177 505 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 RTP5Q14D33 572 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 ZNF326Q5BKZ1 582 aaKnown RBP5.73□□□□□ -1.49
VLDLR-204ENST00000478776 SLITRK4Q8IW52 837 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
VLDLR-204ENST00000478776 NT5C1AQ9BXI3 368 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 BCL2L13Q9BXK5 485 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 PMF1-BGLAPU3KQ54 211 aa5.73□□□□□ -1.49
VLDLR-204ENST00000478776 C9IYK1 514 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 H0Y8X5 98 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 SRGAP3O43295 1099 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 IMPDH2P12268 514 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 NCAM1P13591 858 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 PMS1P54277 932 aaKnown RBP5.72□□□□□ -1.49
VLDLR-204ENST00000478776 NT5DC1Q5TFE4 455 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 KIAA0825Q8IV33 1275 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 GIPC2Q8TF65 315 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 BRF1Q92994 677 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 GPR20Q99678 358 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 SPON2Q9BUD6 331 aa5.72□□□□□ -1.49
VLDLR-204ENST00000478776 SF3B6Q9Y3B4 125 aaKnown RBP5.72□□□□□ -1.49
VLDLR-204ENST00000478776 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
VLDLR-204ENST00000478776 K7ESM1 405 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 TACR1P25103 407 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 CEBPAP49715 358 aaPredicted RBP5.71□□□□□ -1.5
VLDLR-204ENST00000478776 PRR5P85299 388 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 POU4F1Q01851 419 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 EFEMP1Q12805 493 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 TDRD10Q5VZ19 366 aaKnown RBP5.71□□□□□ -1.5
VLDLR-204ENST00000478776 CABP7Q86V35 215 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 FERD3LQ96RJ6 166 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 RNF38Q9H0F5 515 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 TMPRSS5Q9H3S3 457 aa5.71□□□□□ -1.5
VLDLR-204ENST00000478776 FGF10O15520 208 aaPredicted RBP5.7□□□□□ -1.5
VLDLR-204ENST00000478776 PRICKLE3O43900 615 aaPredicted RBP5.7□□□□□ -1.5
VLDLR-204ENST00000478776 TP53P04637 393 aaPredicted RBP5.7□□□□□ -1.5
VLDLR-204ENST00000478776 CD3EP07766 207 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 INSRRP14616 1297 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 L1CAMP32004 1257 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 CORO7P57737 925 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 ZNF827Q17R98 1081 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 ANKRD39Q53RE8 183 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 ZFYVE27Q5T4F4 411 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 FBXW10Q5XX13 1052 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 DCAF15Q66K64 600 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 LIPIQ6XZB0 460 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 FIBCD1Q8N539 461 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 ALG3Q92685 438 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 RNF34Q969K3 372 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 PTCHD1Q96NR3 888 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 GP6Q9HCN6 339 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 FAM86C1Q9NVL1 165 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 HCFC2Q9Y5Z7 792 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
VLDLR-204ENST00000478776 A0A1B0GTL3 188 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 SHOXO15266 292 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 ITGA4P13612 1032 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 ZNF16P17020 682 aaPredicted RBP5.69□□□□□ -1.5
VLDLR-204ENST00000478776 ZNF445P59923 1031 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 TCEAL1Q15170 157 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 FERMT3Q86UX7 667 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 FCRL3Q96P31 734 aaPredicted RBP5.69□□□□□ -1.5
VLDLR-204ENST00000478776 TM9SF2Q99805 663 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 SRRTQ9BXP5 876 aaKnown RBP5.69□□□□□ -1.5
VLDLR-204ENST00000478776 CNOT11Q9UKZ1 510 aaKnown RBP5.69□□□□□ -1.5
VLDLR-204ENST00000478776 ZNRF3Q9ULT6 936 aa5.69□□□□□ -1.5
VLDLR-204ENST00000478776 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
VLDLR-204ENST00000478776 ACRP10323 421 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 ATF2P15336 505 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 CD247P20963 164 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 PUM1Q14671 1186 aaKnown RBP eCLIP5.68□□□□□ -1.5
VLDLR-204ENST00000478776 VWA3BQ502W6 1294 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 AXDND1Q5T1B0 1012 aaPredicted RBP5.68□□□□□ -1.5
VLDLR-204ENST00000478776 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 NLGN2Q8NFZ4 835 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
VLDLR-204ENST00000478776 ZDHHC15Q96MV8 337 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 NOL6Q9H6R4 1146 aaKnown RBP5.68□□□□□ -1.5
VLDLR-204ENST00000478776 NUDT5Q9UKK9 219 aa5.68□□□□□ -1.5
VLDLR-204ENST00000478776 GJA9P57773 515 aa5.67□□□□□ -1.5
VLDLR-204ENST00000478776 HHIPL2Q6UWX4 724 aa5.67□□□□□ -1.5
VLDLR-204ENST00000478776 TAB3Q8N5C8 712 aaPredicted RBP5.67□□□□□ -1.5
VLDLR-204ENST00000478776 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
VLDLR-204ENST00000478776 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
VLDLR-204ENST00000478776 MYRFQ9Y2G1 1151 aa5.67□□□□□ -1.5
VLDLR-204ENST00000478776 DIS3Q9Y2L1 958 aaKnown RBP5.67□□□□□ -1.5
VLDLR-204ENST00000478776 ZNF451Q9Y4E5 1061 aa5.67□□□□□ -1.5
VLDLR-204ENST00000478776 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
VLDLR-204ENST00000478776 ASGR2P07307 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms