RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 SSH1Q8WYL5 1049 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 ATOH1Q92858 354 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 MEIS3Q99687 375 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 PDGFCQ9NRA1 345 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 SCN10AQ9Y5Y9 1956 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 PTPRZ1P23471 2315 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 H0Y858 1186 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 DYNC1LI2O43237 492 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-217ENST00000478743 LTBRP36941 435 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 ID4P47928 161 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 FAM117BQ6P1L5 589 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 TRIM67Q6ZTA4 783 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 DBNDD2Q9BQY9 259 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
HDAC8-217ENST00000478743 DMXL1Q9Y485 3027 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 PRR23AA6NEV1 266 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 DLX2Q07687 328 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-217ENST00000478743 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 MAGEB6Q8N7X4 407 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 PABPC5Q96DU9 382 aaKnown RBP14.9□□□□□ -0.02
HDAC8-217ENST00000478743 TEX13BQ9BXU2 312 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 ARHGEF10LQ9HCE6 1279 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
HDAC8-217ENST00000478743 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-217ENST00000478743 SRGAP3O43295 1099 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 RFC2P35250 354 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 COPB2P35606 906 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 KCNJ6P48051 423 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
HDAC8-217ENST00000478743 FBXL6Q8N531 539 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 FBXO22Q8NEZ5 403 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 MRPL38Q96DV4 380 aaKnown RBP14.89□□□□□ -0.03
HDAC8-217ENST00000478743 RIOK1Q9BRS2 568 aaKnown RBP14.89□□□□□ -0.03
HDAC8-217ENST00000478743 ZBED2Q9BTP6 218 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
HDAC8-217ENST00000478743 EPG5Q9HCE0 2579 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 MYO7AQ13402 2215 aa14.89□□□□□ -0.03
HDAC8-217ENST00000478743 IDH1O75874 414 aaKnown RBP14.88□□□□□ -0.03
HDAC8-217ENST00000478743 BAIAP3O94812 1187 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 GJB5O95377 273 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
HDAC8-217ENST00000478743 SMAD2Q15796 467 aaKnown RBP14.88□□□□□ -0.03
HDAC8-217ENST00000478743 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
HDAC8-217ENST00000478743 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 PRRX2Q99811 253 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 CLDND1Q9NY35 253 aa14.88□□□□□ -0.03
HDAC8-217ENST00000478743 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
HDAC8-217ENST00000478743 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 MBTPS2O43462 519 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 RAD21O60216 631 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
HDAC8-217ENST00000478743 EEPD1Q7L9B9 569 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 BANK1Q8NDB2 785 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 FSD1Q9BTV5 496 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
HDAC8-217ENST00000478743 TLR7Q9NYK1 1049 aaKnown RBP14.87□□□□□ -0.03
HDAC8-217ENST00000478743 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
HDAC8-217ENST00000478743 ZXDAP98168 799 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 TAPT1Q6NXT6 567 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.86□□□□□ -0.03
HDAC8-217ENST00000478743 ANKRD35Q8N283 1001 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 SDR42E1Q8WUS8 393 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 CTAGE1Q96RT6 745 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 RAD9AQ99638 391 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
HDAC8-217ENST00000478743 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 MICAL3Q7RTP6 2002 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 TBX10O75333 385 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 PDGFBP01127 241 aaPredicted RBP14.85□□□□□ -0.03
HDAC8-217ENST00000478743 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 PURAQ00577 322 aaKnown RBP14.85□□□□□ -0.03
HDAC8-217ENST00000478743 NBPF20Q3BBV1 942 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 TIGD5Q53EQ6 642 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 FAM47CQ5HY64 1035 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 FAM133AQ8N9E0 248 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 ASIC4Q96FT7 647 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 CNTNAP3BQ96NU0 1288 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 SEZ6LQ9BYH1 1024 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 CNTNAP3Q9BZ76 1288 aa14.85□□□□□ -0.03
HDAC8-217ENST00000478743 NCOR2Q9Y618 2525 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 CYP2D7A0A087X1C5 515 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 ZEB2O60315 1214 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 MYL3P08590 195 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 AVPR2P30518 371 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC8-217ENST00000478743 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
HDAC8-217ENST00000478743 SH2D4AQ9H788 454 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms