RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 NSMFQ6X4W1 530 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 AP5M1Q9H0R1 490 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 MTMR10Q9NXD2 777 aa17■□□□□ 0.31
SMARCE1-209ENST00000478349 TRIM43BA6NCK2 446 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 B4DLN1 442 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 ASGR1P07306 291 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 MRPL12P52815 198 aaKnown RBP16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 SMAD3P84022 425 aaKnown RBP16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 Q7L0L9 218 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 TRIM43Q96BQ3 446 aaPredicted RBP16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 FGD4Q96M96 766 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
SMARCE1-209ENST00000478349 ZNF213O14771 459 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 SDSP20132 328 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 NUCB1Q02818 461 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 SHHQ15465 462 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 GPATCH4Q5T3I0 446 aaKnown RBP16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 CCSAPQ6IQ19 270 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 RNPC3Q96LT9 517 aaKnown RBP16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 TMEM47Q9BQJ4 181 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 PLXNA1Q9UIW2 1896 aa16.98■□□□□ 0.31
SMARCE1-209ENST00000478349 LAMA3Q16787 3333 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 TMEM265A0A087WTH1 108 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 HAND2P61296 217 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 NKX3-2P78367 333 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 Q9Y3F1 56 aa16.97■□□□□ 0.31
SMARCE1-209ENST00000478349 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 ARVCFO00192 962 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 PDHBP11177 359 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 BRDTQ58F21 947 aaPredicted RBP16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 KATNBL1Q9H079 304 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 GPCPD1Q9NPB8 672 aa16.96■□□□□ 0.31
SMARCE1-209ENST00000478349 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
SMARCE1-209ENST00000478349 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.3
SMARCE1-209ENST00000478349 RAD50Q92878 1312 aa16.96■□□□□ 0.3
SMARCE1-209ENST00000478349 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 PTPDC1A2A3K4 754 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 MYADML2A6NDP7 307 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 TIMP1P01033 207 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 SLC16A2P36021 539 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 IMMTQ16891 758 aaKnown RBP16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 C9orf50Q5SZB4 431 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 MAF1Q9H063 256 aa16.95■□□□□ 0.3
SMARCE1-209ENST00000478349 ZNFX1Q9P2E3 1918 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 SNAP25P60880 206 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 FBXO16Q8IX29 292 aaPredicted RBP16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 DSCC1Q9BVC3 393 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 MTIF3Q9H2K0 278 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 CNNM2Q9H8M5 875 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 GNEQ9Y223 722 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-209ENST00000478349 ADCY6O43306 1168 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 SNHG28P0DPA3 235 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 CDK7P50613 346 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 ALDH5A1P51649 535 aaPredicted RBP16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 BAATQ14032 418 aaPredicted RBP16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 TTBK2Q6IQ55 1244 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 PSRC1Q6PGN9 363 aaPredicted RBP16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 KIAA1211Q6ZU35 1233 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 RASGRP2Q7LDG7 609 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 TBC1D10CQ8IV04 446 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 MORC4Q8TE76 937 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 KRT23Q9C075 422 aa16.93■□□□□ 0.3
SMARCE1-209ENST00000478349 NKRFO15226 690 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 SMPD1P17405 629 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 CPT1AP50416 773 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 PDE4DQ08499 809 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 EEPD1Q7L9B9 569 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms