RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 MROH2BQ7Z745 1585 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 PEG3Q9GZU2 1588 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 IFRD1O00458 451 aaPredicted RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ADAMTS4O75173 837 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 TGFB3P10600 412 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 CD151P48509 253 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 PMS1P54277 932 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 CASP7P55210 303 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 GP2P55259 537 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 IKZF1Q13422 519 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ZYXQ15942 572 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 BBS9Q3SYG4 887 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ANGEL2Q5VTE6 544 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 TAF3Q5VWG9 929 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 UNC5AQ6ZN44 842 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ZNF574Q6ZN55 896 aaPredicted RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 NFXL1Q6ZNB6 911 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 SPRED2Q7Z698 418 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 TTC6Q86TZ1 520 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 MCF2L2Q86YR7 1114 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 TP53INP2Q8IXH6 220 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 PDILTQ8N807 584 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 GPR62Q9BZJ7 368 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 MKRN2Q9H000 416 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 TMX1Q9H3N1 280 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 PHAXQ9H814 394 aaKnown RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ATP13A1Q9HD20 1204 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 PAK6Q9NQU5 681 aaPredicted RBP4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 SEMA3GQ9NS98 782 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ZSWIM5Q9P217 1185 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 SFMBT1Q9UHJ3 866 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 ODF2LQ9ULJ1 636 aa4.29□□□□□ -1.72
FNDC3B-209ENST00000478016 A0A1W2PQH9 124 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 S100BP04271 92 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 CD8BP10966 210 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 SRFP11831 508 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 FLT3P36888 993 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 CD96P40200 585 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 LMOD3Q0VAK6 560 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 NMIQ13287 307 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 KCTD2Q14681 263 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 PLCL1Q15111 1095 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 PPP2R5EQ16537 467 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 CLEC16AQ2KHT3 1053 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 TNNI3KQ59H18 835 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 TMPRSS7Q7RTY8 843 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 JAZF1Q86VZ6 243 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 ZSCAN30Q86W11 494 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 SAMD3Q8N6K7 520 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 FAM169BQ8N8A8 192 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 ZNF513Q8N8E2 541 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 FRS2Q8WU20 508 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 RSPH1Q8WYR4 309 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 SMARCC1Q92922 1105 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 UBE2FQ969M7 185 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 BORCS6Q96GS4 357 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 CEP89Q96ST8 783 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 MYCBPQ99417 103 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 SEZ6LQ9BYH1 1024 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 DUSP15Q9H1R2 295 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 IFT57Q9NWB7 429 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 ACAD8Q9UKU7 415 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 ZNF214Q9UL59 606 aaPredicted RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 NOL7Q9UMY1 257 aaKnown RBP4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 SMC3Q9UQE7 1217 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 MRVI1Q9Y6F6 885 aa4.28□□□□□ -1.72
FNDC3B-209ENST00000478016 LAMC3Q9Y6N6 1575 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 WIZO95785 1651 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 FUT4P22083 530 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 SATB1Q01826 763 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 ZP2Q05996 745 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 AUHQ13825 339 aaKnown RBP4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 GAB4Q2WGN9 574 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 IQCEQ6IPM2 695 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 CATIPQ7Z7H3 387 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 TSPYL5Q86VY4 417 aaPredicted RBP4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 FMNL3Q8IVF7 1028 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 CCDC144CPQ8IYA2 1237 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 MIGA1Q8NAN2 632 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 PPM1EQ8WY54 764 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 ITFG2Q969R8 447 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 FAM210AQ96ND0 272 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 FMNL2Q96PY5 1086 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 APBA2Q99767 749 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 TMX4Q9H1E5 349 aaPredicted RBP4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 PRKAG3Q9UGI9 489 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 TCEAL9Q9UHQ7 104 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 PCDHB12Q9Y5F1 795 aa4.27□□□□□ -1.73
FNDC3B-209ENST00000478016 LTBP3Q9NS15 1303 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
FNDC3B-209ENST00000478016 C9IYK1 514 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms