RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 AP5M1Q9H0R1 490 aa24.21■■□□□ 1.47
PDLIM1-202ENST00000477757 A1CFQ9NQ94 594 aaKnown RBP24.21■■□□□ 1.47
PDLIM1-202ENST00000477757 SOWAHBA6NEL2 793 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 ASB14A6NK59 587 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 GTPBP6O43824 516 aaPredicted RBP24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 FDX1P10109 184 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 SMPD1P17405 629 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 ZSCAN25Q6NSZ9 544 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 MKL1Q969V6 931 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 SCLYQ96I15 445 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 LRFN3Q9BTN0 628 aa24.2■■□□□ 1.46
PDLIM1-202ENST00000477757 CA3P07451 260 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 PTGS1P23219 599 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 PSMC6P62333 389 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 TTLL4Q14679 1199 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 TMEM67Q5HYA8 995 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 GIMAP6Q6P9H5 292 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 ALDH8A1Q9H2A2 487 aaPredicted RBP24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 RNF146Q9NTX7 359 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 COG5Q9UP83 839 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 Q9Y3F1 56 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 PIEZO1Q92508 2521 aa24.19■■□□□ 1.46
PDLIM1-202ENST00000477757 DYNC1LI2O43237 492 aaPredicted RBP24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 RPAP2Q8IXW5 612 aaPredicted RBP24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 STK11IPQ8N1F8 1099 aa24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 LRRC47Q8N1G4 583 aaKnown RBP24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 CEP95Q96GE4 821 aa24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 STRBPQ96SI9 672 aaKnown RBP24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 BCL11AQ9H165 835 aa24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 MTMR4Q9NYA4 1195 aa24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 COG6Q9Y2V7 657 aa24.18■■□□□ 1.46
PDLIM1-202ENST00000477757 PLIN4Q96Q06 1357 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 GSG1L2A8MUP6 293 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 RFXAPO00287 272 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 RAB11FIP3O75154 756 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 HMMRO75330 724 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 PANK1Q8TE04 598 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 EPHX3Q9H6B9 360 aa24.17■■□□□ 1.46
PDLIM1-202ENST00000477757 ZNF536O15090 1300 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 EPOPA6NHQ4 379 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 TTLL1O95922 423 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 BMP3P12645 472 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 TKFCQ3LXA3 575 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 IQSEC1Q6DN90 963 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 PDGFCQ9NRA1 345 aa24.16■■□□□ 1.46
PDLIM1-202ENST00000477757 MINDY4BA8MYZ0 360 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 STAT2P52630 851 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 TMEM31Q5JXX7 168 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 SLFN13Q68D06 897 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 TAPT1Q6NXT6 567 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 FBXO16Q8IX29 292 aaPredicted RBP24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 SIRT2Q8IXJ6 389 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 SLC9A7Q96T83 725 aa24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 DDX49Q9Y6V7 483 aaKnown RBP24.15■■□□□ 1.46
PDLIM1-202ENST00000477757 TMEM232C9JQI7 657 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 TLL1O43897 1013 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 SUPT20HL2P0C7V6 817 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 TANC1Q9C0D5 1861 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 ZNF287Q9HBT7 754 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 EPB41L4AQ9HCS5 686 aaPredicted RBP24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 TRMT13Q9NUP7 481 aaKnown RBP24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 LCTP09848 1927 aa24.14■■□□□ 1.45
PDLIM1-202ENST00000477757 TNKSO95271 1327 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 PRDM1O75626 825 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 CYP2C9P11712 490 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 TMEM63BQ5T3F8 832 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 KRT40Q6A162 431 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 FAM160B2Q86V87 743 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 ZNF444Q8N0Y2 327 aaPredicted RBP24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 CERS4Q9HA82 394 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 VTA1Q9NP79 307 aa24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 COL4A4P53420 1690 aaPredicted RBP24.13■■□□□ 1.45
PDLIM1-202ENST00000477757 SCN5AQ14524 2016 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 ACTN1P12814 892 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 RFC2P35250 354 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 TAP1Q03518 808 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 EEPD1Q7L9B9 569 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 DEFB128Q7Z7B8 93 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 PHOSPHO2Q8TCD6 241 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 MORC4Q8TE76 937 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 GMCL1Q96IK5 515 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 TRERF1Q96PN7 1200 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 CYP39A1Q9NYL5 469 aa24.12■■□□□ 1.45
PDLIM1-202ENST00000477757 ARHGEF15O94989 841 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 CHURC1Q8WUH1 139 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 ARNTL2Q8WYA1 636 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 HLA-CQ95604 372 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 C11orf16Q9NQ32 467 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 POLR3EQ9NVU0 708 aa24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 ISY1Q9ULR0 285 aaKnown RBP24.11■■□□□ 1.45
PDLIM1-202ENST00000477757 ALAS1P13196 640 aa24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 PURAQ00577 322 aaKnown RBP24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 DUSP28Q4G0W2 176 aa24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 STAG1Q8WVM7 1258 aa24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 OSBP2Q969R2 916 aa24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 MUC6Q6W4X9 2439 aa24.1■■□□□ 1.45
PDLIM1-202ENST00000477757 PLA2G6O60733 806 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 GPR37L1O60883 481 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 TDO2P48775 406 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms