RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 STOML1Q9UBI4 398 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 DAGLAQ9Y4D2 1042 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 CASZ1Q86V15 1759 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 C5P01031 1676 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 KAT6BQ8WYB5 2073 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 COL24A1Q17RW2 1714 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 PLSCR1O15162 318 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 DYRK3O43781 588 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 BPNT1O95861 308 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 TNNI2P48788 182 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 PAK2Q13177 524 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 AMOTQ4VCS5 1084 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 ARTNQ5T4W7 220 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 CFAP53Q96M91 514 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 NT5C1AQ9BXI3 368 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 TGIF2Q9GZN2 237 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 ZFP64Q9NPA5 681 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 POLR3KQ9Y2Y1 108 aaPredicted RBP6.93□□□□□ -1.3
VPS45-207ENST00000477558 CEMIPQ8WUJ3 1361 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 FANCGO15287 622 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 KCNQ2O43526 872 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 GRIN3BO60391 1043 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 GRK4P32298 578 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 MPP2Q14168 576 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 SEZ6Q53EL9 994 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 REC114Q7Z4M0 266 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 DEFB132Q7Z7B7 95 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 IFNL2Q8IZJ0 200 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 PLEKHF1Q96S99 279 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 WNT10AQ9GZT5 417 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
VPS45-207ENST00000477558 SSU72Q9NP77 194 aaKnown RBP6.93□□□□□ -1.3
VPS45-207ENST00000477558 TJP1Q07157 1748 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 KDM3BQ7LBC6 1761 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 KCPQ6ZWJ8 1503 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 HMOX1P09601 288 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 ETF1P62495 437 aaKnown RBP6.92□□□□□ -1.3
VPS45-207ENST00000477558 PLEKHO1Q53GL0 409 aaPredicted RBP6.92□□□□□ -1.3
VPS45-207ENST00000477558 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS45-207ENST00000477558 NKD1Q969G9 470 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 FBRSQ9HAH7 460 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
VPS45-207ENST00000477558 LRP5O75197 1615 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 UBR3Q6ZT12 1888 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 MAP3K5Q99683 1374 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 HSP90AB1P08238 724 aaKnown RBP6.91□□□□□ -1.3
VPS45-207ENST00000477558 PRKAR2BP31323 418 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 APOBRQ0VD83 1088 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 NKG7Q16617 165 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 MTHFSDQ2M296 383 aaKnown RBP6.91□□□□□ -1.3
VPS45-207ENST00000477558 ZNF530Q6P9A1 599 aaPredicted RBP6.91□□□□□ -1.3
VPS45-207ENST00000477558 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 YIPF2Q9BWQ6 316 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 C1GALT1Q9NS00 363 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 NUDCQ9Y266 331 aa6.91□□□□□ -1.3
VPS45-207ENST00000477558 C4BP0C0L5 1744 aa6.9□□□□□ -1.3
VPS45-207ENST00000477558 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 ADMP35318 185 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 CNGB1Q14028 1251 aaPredicted RBP6.9□□□□□ -1.31
VPS45-207ENST00000477558 MAP7Q14244 749 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 EZH2Q15910 746 aaKnown RBP6.9□□□□□ -1.31
VPS45-207ENST00000477558 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.31
VPS45-207ENST00000477558 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.31
VPS45-207ENST00000477558 PAOXQ6QHF9 649 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 PHACTR3Q96KR7 559 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.31
VPS45-207ENST00000477558 MYH14Q7Z406 1995 aaKnown RBP6.9□□□□□ -1.31
VPS45-207ENST00000477558 PALLDQ8WX93 1383 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 U2SURPO15042 1029 aaKnown RBP6.89□□□□□ -1.31
VPS45-207ENST00000477558 PGRP06401 933 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 U2AF1L5P0DN76 240 aaPredicted RBP6.89□□□□□ -1.31
VPS45-207ENST00000477558 MCM4P33991 863 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 U2AF1Q01081 240 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS45-207ENST00000477558 CLCQ05315 142 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 CDK5R2Q13319 367 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 SLBPQ14493 270 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS45-207ENST00000477558 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 SLITRK4Q8IW52 837 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 PIGBQ92521 554 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 MFSD14AQ96MC6 490 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 TJP2Q9UDY2 1190 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 PRKAG2Q9UGJ0 569 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 PCDHB14Q9Y5E9 798 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 TACC3Q9Y6A5 838 aa6.89□□□□□ -1.31
VPS45-207ENST00000477558 LAMB4A4D0S4 1761 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 PLCG1P19174 1290 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 FSTP19883 344 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 TXNRD1Q16881 649 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 CCDC184Q52MB2 194 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms