RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SNAI1O95863 264 aaPredicted RBP15.64■□□□□ 0.09
ACTN4-205ENST00000477174 KIF5BP33176 963 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 EXOSC10Q01780 885 aaKnown RBP15.64■□□□□ 0.09
ACTN4-205ENST00000477174 CNTN2Q02246 1040 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
ACTN4-205ENST00000477174 NSMFQ6X4W1 530 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 CLEC4DQ8WXI8 215 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 MTMR8Q96EF0 704 aa15.64■□□□□ 0.09
ACTN4-205ENST00000477174 CCDC69A6NI79 296 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 ASB14A6NK59 587 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 CALM1P0DP23 149 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 CALM2P0DP24 149 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 CALM3P0DP25 149 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 SMARCA1P28370 1054 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 TRAF1Q13077 416 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 BAATQ14032 418 aaPredicted RBP15.63■□□□□ 0.09
ACTN4-205ENST00000477174 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 NFXL1Q6ZNB6 911 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 ZNF654Q8IZM8 581 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 FGD4Q96M96 766 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 HTATIP2Q9BUP3 242 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 ABHD16BQ9H3Z7 469 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 RIOX1Q9H6W3 641 aa15.63■□□□□ 0.09
ACTN4-205ENST00000477174 GPHNQ9NQX3 736 aaPredicted RBP15.63■□□□□ 0.09
ACTN4-205ENST00000477174 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 LOC102724159A0A0B4J2E5 919 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 SOWAHBA6NEL2 793 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 NFIBO00712 420 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ZBTB5O15062 677 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ZNF865P0CJ78 1059 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 PWP2Q15269 919 aaKnown RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ADCK5Q3MIX3 580 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 RNF207Q6ZRF8 634 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 SGMS1Q86VZ5 419 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 CCDC144CPQ8IYA2 1237 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ARRDC4Q8NCT1 418 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 CTCFLQ8NI51 663 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 NUP133Q8WUM0 1156 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 PAWRQ96IZ0 340 aaKnown RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 LZTS2Q9BRK4 669 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 AMNQ9BXJ7 453 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ADD3Q9UEY8 706 aaKnown RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
ACTN4-205ENST00000477174 SLC12A7Q9Y666 1083 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ABCB11O95342 1321 aa15.62■□□□□ 0.09
ACTN4-205ENST00000477174 ZNFX1Q9P2E3 1918 aaKnown RBP15.61■□□□□ 0.09
ACTN4-205ENST00000477174 TAL1P17542 331 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-205ENST00000477174 GNAQP50148 359 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 ACVR2BQ13705 512 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 USH1GQ495M9 461 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 ARMCX2Q7L311 632 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 FAM184BQ9ULE4 1060 aa15.61■□□□□ 0.09
ACTN4-205ENST00000477174 PNMA6FA0A0J9YX94 578 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 PTPDC1A2A3K4 754 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 CYTH3O43739 400 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 RARBP10826 455 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 AKR1A1P14550 325 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 RPS6P62753 249 aaKnown RBP15.6■□□□□ 0.09
ACTN4-205ENST00000477174 SYNE3Q6ZMZ3 975 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 FANCBQ8NB91 859 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 MORC4Q8TE76 937 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 USP26Q9BXU7 913 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 LRRC2Q9BYS8 371 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 C11orf49Q9H6J7 331 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 PCDHA1Q9Y5I3 950 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 SNX14Q9Y5W7 946 aa15.6■□□□□ 0.09
ACTN4-205ENST00000477174 B4DLN1 442 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 DNM1LO00429 736 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
ACTN4-205ENST00000477174 PSMA5P28066 241 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 MRPL12P52815 198 aaKnown RBP15.59■□□□□ 0.09
ACTN4-205ENST00000477174 SLC35G1Q2M3R5 365 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 SAMD3Q8N6K7 520 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 DNERQ8NFT8 737 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 DIS3LQ8TF46 1054 aaKnown RBP15.59■□□□□ 0.09
ACTN4-205ENST00000477174 DPF3Q92784 378 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 PIGSQ96S52 555 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
ACTN4-205ENST00000477174 SPZ1Q9BXG8 430 aa15.59■□□□□ 0.09
ACTN4-205ENST00000477174 MAP3K20Q9NYL2 800 aaKnown RBP15.59■□□□□ 0.09
ACTN4-205ENST00000477174 COL6A1P12109 1028 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 CALML3P27482 149 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 CCDC144BQ3MJ40 725 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 BLOC1S2Q6QNY1 142 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 SLC30A10Q6XR72 485 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 FBXL16Q8N461 479 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 JAKMIP1Q96N16 626 aaKnown RBP15.58■□□□□ 0.08
ACTN4-205ENST00000477174 PURBQ96QR8 312 aaKnown RBP15.58■□□□□ 0.08
ACTN4-205ENST00000477174 MYL10Q9BUA6 226 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 KATNBL1Q9H079 304 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 XPNPEP3Q9NQH7 507 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
ACTN4-205ENST00000477174 ASTN1O14525 1302 aa15.58■□□□□ 0.08
ACTN4-205ENST00000477174 PPP1R11O60927 126 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms