RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 DSG3P32926 999 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 PSMC4P43686 418 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
PSMD4-211ENST00000476855 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 WASF1Q92558 559 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 KIFC2Q96AC6 838 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 TRIM47Q96LD4 638 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 COL6A3P12111 3177 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 LCTP09848 1927 aa18.33■□□□□ 0.52
PSMD4-211ENST00000476855 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
PSMD4-211ENST00000476855 SYT1P21579 422 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 HOXD10P28358 340 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 CTGFP29279 349 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 GRK4P32298 578 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 GJA8P48165 433 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 SNAP25P60880 206 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 COG2Q14746 738 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 WWC2Q6AWC2 1192 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 UBE2Q1Q7Z7E8 422 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 REPS2Q8NFH8 660 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 RAET1EQ8TD07 263 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 PRO3102Q9H379 93 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 CPA4Q9UI42 421 aa18.32■□□□□ 0.52
PSMD4-211ENST00000476855 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 MYH7BA7E2Y1 1941 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 ZNF536O15090 1300 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 STXBP3O00186 592 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 GJB1P08034 283 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 CCL5P13501 91 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 PKP1Q13835 747 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 LARP1BQ659C4 914 aaKnown RBP18.31■□□□□ 0.52
PSMD4-211ENST00000476855 TYW1BQ6NUM6 668 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 ANKRD23Q86SG2 305 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.521e-7■■■■□ 26.1
PSMD4-211ENST00000476855 ASCC2Q9H1I8 757 aaPredicted RBP18.31■□□□□ 0.52
PSMD4-211ENST00000476855 SLC38A10Q9HBR0 1119 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
PSMD4-211ENST00000476855 SLC45A1Q9Y2W3 748 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 NR2E3Q9Y5X4 410 aa18.31■□□□□ 0.52
PSMD4-211ENST00000476855 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 VWA5AO00534 786 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 FDX1P10109 184 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 PDCP20941 246 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 OSBPP22059 807 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 FOSBP53539 338 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.521e-24■■■□□ 15.4
PSMD4-211ENST00000476855 LBX2Q6XYB7 198 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
PSMD4-211ENST00000476855 FBXO18Q8NFZ0 1043 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 SH3GLB2Q9NR46 395 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 VPS54Q9P1Q0 977 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 BIN2Q9UBW5 565 aaPredicted RBP18.3■□□□□ 0.52
PSMD4-211ENST00000476855 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
PSMD4-211ENST00000476855 MGAMO43451 1857 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
PSMD4-211ENST00000476855 STX6O43752 255 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 NPY5RQ15761 445 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 KRT40Q6A162 431 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 SAMD1Q6SPF0 538 aaPredicted RBP18.29■□□□□ 0.52
PSMD4-211ENST00000476855 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 FAM177A1Q8N128 213 aaPredicted RBP18.29■□□□□ 0.52
PSMD4-211ENST00000476855 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
PSMD4-211ENST00000476855 RNF208Q9H0X6 261 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 MTMR6Q9Y217 621 aa18.29■□□□□ 0.52
PSMD4-211ENST00000476855 PDHXO00330 501 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 TAL1P17542 331 aaPredicted RBP18.28■□□□□ 0.52
PSMD4-211ENST00000476855 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
PSMD4-211ENST00000476855 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 FBXO11Q86XK2 927 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 COA7Q96BR5 231 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 ZDHHC9Q9Y397 364 aa18.28■□□□□ 0.52
PSMD4-211ENST00000476855 ADGRA2Q96PE1 1338 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 PLXNA1Q9UIW2 1896 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 ESYT2A0FGR8 921 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 ATP2A1O14983 1001 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 BRD1O95696 1058 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 ICAM1P05362 532 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 HERVK_113P62684 666 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 UBXN2AP68543 259 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 PPP1R18Q6NYC8 613 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 AMNQ9BXJ7 453 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
PSMD4-211ENST00000476855 KCNJ14Q9UNX9 436 aa18.27■□□□□ 0.52
PSMD4-211ENST00000476855 A0A1W2PPC1 479 aa18.26■□□□□ 0.51
PSMD4-211ENST00000476855 ZBED4O75132 1171 aa18.26■□□□□ 0.51
PSMD4-211ENST00000476855 CNMDO75829 334 aa18.26■□□□□ 0.51
PSMD4-211ENST00000476855 FARP2O94887 1054 aaPredicted RBP18.26■□□□□ 0.51
PSMD4-211ENST00000476855 MMP1P03956 469 aa18.26■□□□□ 0.51
PSMD4-211ENST00000476855 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms