RNA–Protein interactions for RNA: ENST00000476807.5

HDLBP-235, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-235ENST00000476807 CDK7P50613 346 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 MCMDC2Q4G0Z9 681 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 MUM1L1Q5H9M0 696 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
HDLBP-235ENST00000476807 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 ARVCFO00192 962 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 ABCB7O75027 752 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 TIMP1P01033 207 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 ICAM1P05362 532 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 CYP39A1Q9NYL5 469 aa13.42□□□□□ -0.26
HDLBP-235ENST00000476807 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
HDLBP-235ENST00000476807 TOP1P11387 765 aaKnown RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 SLC16A2P36021 539 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 BEX3Q00994 111 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 BTNL9Q6UXG8 535 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 FAM126BQ8IXS8 530 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 TTYH1Q9H313 450 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
HDLBP-235ENST00000476807 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
HDLBP-235ENST00000476807 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-235ENST00000476807 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 MCM3APO60318 1980 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 SMPD1P17405 629 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 HAND2P61296 217 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 AAMPQ13685 434 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 NSMFQ6X4W1 530 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-235ENST00000476807 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
HDLBP-235ENST00000476807 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 CABYRO75952 493 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PDHBP11177 359 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PTGS1P23219 599 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PPIGQ13427 754 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 SLC43A3Q8NBI5 491 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDLBP-235ENST00000476807 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
HDLBP-235ENST00000476807 CDH23Q9H251 3354 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-235ENST00000476807 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-235ENST00000476807 NFIBO00712 420 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-235ENST00000476807 CD4P01730 458 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 BAATQ14032 418 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-235ENST00000476807 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
HDLBP-235ENST00000476807 Q9Y3F1 56 aa13.38□□□□□ -0.27
HDLBP-235ENST00000476807 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 ZEB2O60315 1214 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 CSF2RAP15509 400 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 SDSP20132 328 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 DNAJB2P25686 324 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-235ENST00000476807 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
HDLBP-235ENST00000476807 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
HDLBP-235ENST00000476807 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
HDLBP-235ENST00000476807 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms