RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 CLEC3AO75596 197 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 TCF3P15923 654 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 DAB2P98082 770 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 CPZQ66K79 652 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 TTC9BQ8N6N2 239 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 GOLM1Q8NBJ4 401 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 RSRP1Q9BUV0 290 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 LRRC3Q9BY71 257 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 PRR13Q9NZ81 148 aa8.3□□□□□ -1.08
NUP58-209ENST00000476553 MEIS1O00470 390 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 ATE1O95260 518 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
NUP58-209ENST00000476553 CCNFP41002 786 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 ANKRD13AQ8IZ07 590 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 CARFQ8N187 725 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 SORCS2Q96PQ0 1159 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 CADPSQ9ULU8 1353 aa8.29□□□□□ -1.08
NUP58-209ENST00000476553 OVOL3O00110 214 aa8.28□□□□□ -1.08
NUP58-209ENST00000476553 GJA9P57773 515 aa8.28□□□□□ -1.08
NUP58-209ENST00000476553 DDX1Q92499 740 aaKnown RBP8.28□□□□□ -1.08
NUP58-209ENST00000476553 PARP2Q9UGN5 583 aa8.28□□□□□ -1.08
NUP58-209ENST00000476553 ZNF20P17024 532 aa8.27□□□□□ -1.09
NUP58-209ENST00000476553 PWP1Q13610 501 aa8.27□□□□□ -1.09
NUP58-209ENST00000476553 EAPPQ56P03 285 aaPredicted RBP8.27□□□□□ -1.09
NUP58-209ENST00000476553 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
NUP58-209ENST00000476553 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
NUP58-209ENST00000476553 PCDHB14Q9Y5E9 798 aa8.27□□□□□ -1.09
NUP58-209ENST00000476553 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
NUP58-209ENST00000476553 ZNF16P17020 682 aaPredicted RBP8.26□□□□□ -1.09
NUP58-209ENST00000476553 MC3RP41968 323 aa8.26□□□□□ -1.09
NUP58-209ENST00000476553 PSMD2Q13200 908 aa8.26□□□□□ -1.09
NUP58-209ENST00000476553 CWF19L2Q2TBE0 894 aaKnown RBP8.26□□□□□ -1.09
NUP58-209ENST00000476553 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
NUP58-209ENST00000476553 SAMD11Q96NU1 681 aa8.26□□□□□ -1.09
NUP58-209ENST00000476553 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
NUP58-209ENST00000476553 TLR3O15455 904 aaKnown RBP8.25□□□□□ -1.09
NUP58-209ENST00000476553 FSHBP01225 129 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 NLRC3Q7RTR2 1065 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 B3GNT8Q7Z7M8 397 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 TMEM192Q8IY95 271 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 ATG4CQ96DT6 458 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 MKRN2Q9H000 416 aaKnown RBP8.25□□□□□ -1.09
NUP58-209ENST00000476553 BRMS1Q9HCU9 246 aa8.25□□□□□ -1.09
NUP58-209ENST00000476553 ARID4BQ4LE39 1312 aaPredicted RBP8.25□□□□□ -1.09
NUP58-209ENST00000476553 GSNP06396 782 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 ASGR2P07307 311 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 NCAM1P13591 858 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 PRR5P85299 388 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 HLA-DQA1Q5Y7H0 255 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 FAM9AQ8IZU1 332 aaPredicted RBP8.24□□□□□ -1.09
NUP58-209ENST00000476553 UBE2Q2Q8WVN8 375 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 UBXN4Q92575 508 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 SLC12A9Q9BXP2 914 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 SCAND2PQ9GZW5 306 aaPredicted RBP8.24□□□□□ -1.09
NUP58-209ENST00000476553 PDLIM7Q9NR12 457 aa8.24□□□□□ -1.09
NUP58-209ENST00000476553 A0A1W2PQ27 194 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 A0A1W2PQ64 194 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 A0A1W2PQC6 194 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 A0A1W2PQD8 194 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 CORO7P57737 925 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 CYP2R1Q6VVX0 501 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 ZNF761Q86XN6 746 aaPredicted RBP8.23□□□□□ -1.09
NUP58-209ENST00000476553 NAT16Q8N8M0 369 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
NUP58-209ENST00000476553 EHMT1Q9H9B1 1298 aa8.23□□□□□ -1.09
NUP58-209ENST00000476553 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
NUP58-209ENST00000476553 AUHQ13825 339 aaKnown RBP8.22□□□□□ -1.09
NUP58-209ENST00000476553 CERS3Q8IU89 383 aa8.22□□□□□ -1.09
NUP58-209ENST00000476553 SLC6A18Q96N87 628 aa8.22□□□□□ -1.09
NUP58-209ENST00000476553 BCL2L13Q9BXK5 485 aa8.22□□□□□ -1.09
NUP58-209ENST00000476553 SHOXO15266 292 aa8.21□□□□□ -1.1
NUP58-209ENST00000476553 C6P13671 934 aa8.21□□□□□ -1.1
NUP58-209ENST00000476553 ZC3H6P61129 1189 aaKnown RBP8.21□□□□□ -1.1
NUP58-209ENST00000476553 JAMLQ86YT9 394 aa8.21□□□□□ -1.1
NUP58-209ENST00000476553 FBXL21Q9UKT6 434 aa8.21□□□□□ -1.1
NUP58-209ENST00000476553 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
NUP58-209ENST00000476553 TNFRSF10CO14798 259 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 FGF10O15520 208 aaPredicted RBP8.2□□□□□ -1.1
NUP58-209ENST00000476553 PLATP00750 562 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 GSTM1P09488 218 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 FBXL19Q6PCT2 694 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 NTMQ9P121 344 aa8.2□□□□□ -1.1
NUP58-209ENST00000476553 ANKRD62A6NC57 917 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 NME1P15531 152 aaKnown RBP8.19□□□□□ -1.1
NUP58-209ENST00000476553 TACR2P21452 398 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
NUP58-209ENST00000476553 TBC1D10BQ4KMP7 808 aaPredicted RBP8.19□□□□□ -1.1
NUP58-209ENST00000476553 Q8N1X5 172 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 ALG3Q92685 438 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 TSPAN17Q96FV3 270 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 LOXL4Q96JB6 756 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
NUP58-209ENST00000476553 SPATA6Q9NWH7 488 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms