RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 LAMA4Q16363 1823 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 ASB14A6NK59 587 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 ALAS1P13196 640 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 PTGS1P23219 599 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 PDE1AP54750 535 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 SNAP25P60880 206 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 GNASQ5JWF2 1037 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 TAPT1Q6NXT6 567 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 BTNL9Q6UXG8 535 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 CHMP4CQ96CF2 233 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
MRPL55-228ENST00000476267 SPC25Q9HBM1 224 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 HELLSQ9NRZ9 838 aa15.53■□□□□ 0.08
MRPL55-228ENST00000476267 GRIN2DO15399 1336 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 A0A0D9SFI3 127 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 ICAM1P05362 532 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 SMPD1P17405 629 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 BEX3Q00994 111 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 TNFAIP2Q03169 654 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-228ENST00000476267 CCDC174Q6PII3 467 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 TICAM2Q86XR7 235 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
MRPL55-228ENST00000476267 DCAF4Q8WV16 495 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 FAM227BQ96M60 508 aa15.52■□□□□ 0.08
MRPL55-228ENST00000476267 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-228ENST00000476267 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-228ENST00000476267 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
MRPL55-228ENST00000476267 FGAP02671 866 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 IKQ13123 557 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-228ENST00000476267 TMEM240Q5SV17 173 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 TMEM63BQ5T3F8 832 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 ANKRD45Q5TZF3 282 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 TLK2Q86UE8 772 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 PURBQ96QR8 312 aaKnown RBP15.51■□□□□ 0.07
MRPL55-228ENST00000476267 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 PDGFCQ9NRA1 345 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 TCP11L1Q9NUJ3 509 aa15.51■□□□□ 0.07
MRPL55-228ENST00000476267 GBF1Q92538 1859 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 CSF2RAP15509 400 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 DNAJB2P25686 324 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 ZNF589Q86UQ0 364 aaPredicted RBP15.5■□□□□ 0.07
MRPL55-228ENST00000476267 FBXO16Q8IX29 292 aaPredicted RBP15.5■□□□□ 0.07
MRPL55-228ENST00000476267 TMEM47Q9BQJ4 181 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 CCPG1Q9ULG6 757 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 ISY1Q9ULR0 285 aaKnown RBP15.5■□□□□ 0.07
MRPL55-228ENST00000476267 Q9Y3F1 56 aa15.5■□□□□ 0.07
MRPL55-228ENST00000476267 CABYRO75952 493 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
MRPL55-228ENST00000476267 FOSL2P15408 326 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 SLC16A2P36021 539 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 PPIGQ13427 754 aaKnown RBP eCLIP15.49■□□□□ 0.071e-6■■■■□ 24.6
MRPL55-228ENST00000476267 GRIN2CQ14957 1233 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 FSCN1Q16658 493 aaKnown RBP15.49■□□□□ 0.07
MRPL55-228ENST00000476267 MCMDC2Q4G0Z9 681 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 IQSEC1Q6DN90 963 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 PPP1R12CQ9BZL4 782 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
MRPL55-228ENST00000476267 MUC3AQ02505 3323 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 UMODL1Q5DID0 1318 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 NFIBO00712 420 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 TLR3O15455 904 aaKnown RBP15.48■□□□□ 0.07
MRPL55-228ENST00000476267 SNHG28P0DPA3 235 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 PDHBP11177 359 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 TOP1P11387 765 aaKnown RBP15.48■□□□□ 0.07
MRPL55-228ENST00000476267 ITGA7Q13683 1181 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
MRPL55-228ENST00000476267 CCDC96Q2M329 555 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 NSMFQ6X4W1 530 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 TMEM199Q8N511 208 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 CLEC4DQ8WXI8 215 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 VWCEQ96DN2 955 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 SEZ6LQ9BYH1 1024 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 PBX4Q9BYU1 374 aa15.48■□□□□ 0.07
MRPL55-228ENST00000476267 RBM47A0AV96 593 aaKnown RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 DYNC1LI2O43237 492 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 ACRP10323 421 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 CYP2C18P33260 490 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 PBX2P40425 430 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 ALDH5A1P51649 535 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 NMIQ13287 307 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 BAATQ14032 418 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 DUSP28Q4G0W2 176 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 SYDE2Q5VT97 1194 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 PSRC1Q6PGN9 363 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-228ENST00000476267 ZNF365Q70YC5 407 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 EEPD1Q7L9B9 569 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 TBC1D10CQ8IV04 446 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 VTI1AQ96AJ9 217 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 ZNF576Q9H609 170 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 IL23AQ9NPF7 189 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 MTMR7Q9Y216 660 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 REV3LO60673 3130 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 CHD7Q9P2D1 2997 aa15.47■□□□□ 0.07
MRPL55-228ENST00000476267 FRMPD2Q68DX3 1309 aaPredicted RBP15.46■□□□□ 0.07
MRPL55-228ENST00000476267 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms