RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 CPXCR1Q8N123 301 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 UHRF1Q96T88 793 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 MTIF3Q9H2K0 278 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 NKX2-4Q9H2Z4 354 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 FEM1BQ9UK73 627 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 CHD7Q9P2D1 2997 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 MCM3APO60318 1980 aa13.18□□□□□ -0.3
EXOSC1-208ENST00000476234 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 BDP1A6H8Y1 2624 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 NCOR1O75376 2440 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 PRDM1O75626 825 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 BMP1P13497 986 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 PDE1AP54750 535 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
EXOSC1-208ENST00000476234 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 ERC2O15083 957 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 FDX1P10109 184 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 PLA2G5P39877 138 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 BEX3Q00994 111 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 GBF1Q92538 1859 aa13.16□□□□□ -0.3
EXOSC1-208ENST00000476234 ZNF536O15090 1300 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 IGFBP4P22692 258 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 MTMR4Q9NYA4 1195 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 Q9Y3F1 56 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
EXOSC1-208ENST00000476234 ASB14A6NK59 587 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 APPP05067 770 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-208ENST00000476234 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 B4GALT4O60513 344 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 PLA2G6O60733 806 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 TTLL1O95922 423 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 BMP3P12645 472 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 SMPD1P17405 629 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 GNAT2P19087 354 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 TDO2P48775 406 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 RABGGTBP53611 331 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 SLC4A7Q9Y6M7 1214 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 REV3LO60673 3130 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
EXOSC1-208ENST00000476234 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 PFKMP08237 780 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 MYOGP15173 224 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 PTGS1P23219 599 aa13.12□□□□□ -0.31
EXOSC1-208ENST00000476234 CCL23P55773 120 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms