RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 MICU3Q86XE3 530 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 MB21D1Q8N884 522 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 ARL10Q8N8L6 244 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 MYD88Q99836 296 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 GDF3Q9NR23 364 aa11.71□□□□□ -0.54
ABCF1-205ENST00000475993 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 PES1O00541 588 aaKnown RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 CD151P48509 253 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 TIMM10P62072 90 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 ATG9AQ7Z3C6 839 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 TCP11Q8WWU5 503 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 DENND2AQ9ULE3 1009 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 LGALS16A8MUM7 142 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 ZBTB43O43298 467 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 TCP1P17987 556 aaKnown RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 PAK1Q13153 545 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 BYSLQ13895 437 aaKnown RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 SETDB1Q15047 1291 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 C8orf74Q6P047 294 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 ZNF507Q8TCN5 953 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-205ENST00000475993 NOD2Q9HC29 1040 aa11.7□□□□□ -0.54
ABCF1-205ENST00000475993 GHRP10912 638 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 ZBED6P86452 979 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SSRP1Q08945 709 aaKnown RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 KIF5AQ12840 1032 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 QPCTQ16769 361 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 MIS18BP1Q6P0N0 1132 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 IRF2BP1Q8IU81 584 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 TRIM42Q8IWZ5 723 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 RBM12BQ8IXT5 1001 aaKnown RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 ARFGAP2Q8N6H7 521 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 WASF1Q92558 559 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CUL5Q93034 780 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SLC12A6Q9UHW9 1150 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 TMEM94Q12767 1356 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 MYL1P05976 194 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CARSP49589 748 aaKnown RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SCNN1BP51168 640 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 PAK2Q13177 524 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 DBN1Q16643 649 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 NSMCE1Q8WV22 266 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CCT6BQ92526 530 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 BICD1Q96G01 975 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 TTYH3Q9C0H2 523 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 CAPN6Q9Y6Q1 641 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 GOLGA8AA7E2F4 631 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 TACC1O75410 805 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 ZFYP08048 801 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 GLI1P08151 1106 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 BZW1Q7L1Q6 419 aaKnown RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 SGMS1Q86VZ5 419 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 KIAA0825Q8IV33 1275 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 FAM81AQ8TBF8 368 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 NELFBQ8WX92 580 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 MMTAG2Q9BU76 263 aaKnown RBP11.69□□□□□ -0.54
ABCF1-205ENST00000475993 TMBIM4Q9HC24 238 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 NFU1Q9UMS0 254 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
ABCF1-205ENST00000475993 PXDNQ92626 1479 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 PARP1P09874 1014 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 MAGEA10P43363 369 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 NR5A1Q13285 461 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 GNPTABQ3T906 1256 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 RRP12Q5JTH9 1297 aaKnown RBP11.68□□□□□ -0.54
ABCF1-205ENST00000475993 FKBP15Q5T1M5 1219 aa11.68□□□□□ -0.54
ABCF1-205ENST00000475993 CWF19L1Q69YN2 538 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms