RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CCDC84Q86UT8 332 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-227ENST00000475832 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
MRPL55-227ENST00000475832 PRPF38AQ8NAV1 312 aaKnown RBP13.98□□□□□ -0.17
MRPL55-227ENST00000475832 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 COA7Q96BR5 231 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 CLMNQ96JQ2 1002 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 TANGO6Q9C0B7 1094 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-227ENST00000475832 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 OTOFQ9HC10 1997 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 PPP6R2O75170 966 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 ZBTB48P10074 688 aaPredicted RBP13.97□□□□□ -0.17
MRPL55-227ENST00000475832 VGLL4Q14135 290 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 SLC39A14Q15043 492 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 NONOQ15233 471 aaKnown RBP eCLIP13.97□□□□□ -0.17
MRPL55-227ENST00000475832 PIK3AP1Q6ZUJ8 805 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 LINC00301Q8NCQ3 95 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
MRPL55-227ENST00000475832 ZBED4O75132 1171 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 VCAM1P19320 739 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 TM4SF4P48230 202 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 PPATQ06203 517 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 TTC38Q5R3I4 469 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-227ENST00000475832 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 TNFRSF25Q93038 417 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 NAP1L4Q99733 375 aaKnown RBP13.96□□□□□ -0.17
MRPL55-227ENST00000475832 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
MRPL55-227ENST00000475832 PCDHA6Q9UN73 950 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 PCDHA8Q9Y5H6 950 aa13.96□□□□□ -0.17
MRPL55-227ENST00000475832 ABCB11O95342 1321 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 FLOT1O75955 427 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 GJA5P36382 358 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 NPY5RQ15761 445 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 SHISA4Q96DD7 197 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 RPAP3Q9H6T3 665 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
MRPL55-227ENST00000475832 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 SNCAIPQ9Y6H5 919 aa13.95□□□□□ -0.18
MRPL55-227ENST00000475832 A0A1W2PQ27 194 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 A0A1W2PQ64 194 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 A0A1W2PQD8 194 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 CXCL11O14625 94 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 FOSP01100 380 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 HMGCS2P54868 508 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 USH1GQ495M9 461 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 SH3D19Q5HYK7 790 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 ADALQ6DHV7 355 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 CAVIN1Q6NZI2 390 aaKnown RBP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 GPT2Q8TD30 523 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 EHMT1Q9H9B1 1298 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 ELP3Q9H9T3 547 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 BIN2Q9UBW5 565 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 MORC2Q9Y6X9 1032 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-227ENST00000475832 MYH6P13533 1939 aa13.94□□□□□ -0.18
MRPL55-227ENST00000475832 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-227ENST00000475832 SPDYE5A6NIY4 337 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 M0R2N6 131 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 CUTAO60888 179 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-227ENST00000475832 INHBEP58166 350 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 PPIL2Q13356 520 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 NEK8Q86SG6 692 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 CCAR1Q8IX12 1150 aaKnown RBP13.93□□□□□ -0.18
MRPL55-227ENST00000475832 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms