RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
COL8A1-206ENST00000474648 RAVER2Q9HCJ3 691 aaKnown RBP11.56□□□□□ -0.56
COL8A1-206ENST00000474648 BARHL2Q9NY43 387 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 SEC63Q9UGP8 760 aaKnown RBP11.56□□□□□ -0.56
COL8A1-206ENST00000474648 PNMA3Q9UL41 463 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 LOC285556D6RIA3 1793 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 ADGRA2Q96PE1 1338 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 PTPRFP10586 1907 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 ADAMTS3O15072 1205 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 HSP90AA1P07900 732 aaKnown RBP11.55□□□□□ -0.56
COL8A1-206ENST00000474648 STAT3P40763 770 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 NPY5RQ15761 445 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 FAM184AQ8NB25 1140 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 WASF1Q92558 559 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 PARK7Q99497 189 aaKnown RBP11.55□□□□□ -0.56
COL8A1-206ENST00000474648 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 SH3GLB2Q9NR46 395 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 PCDHA1Q9Y5I3 950 aa11.55□□□□□ -0.56
COL8A1-206ENST00000474648 RLFQ13129 1914 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 OPLAHO14841 1288 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 CA12O43570 354 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 SYT1P21579 422 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 GCLCP48506 637 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 FOSBP53539 338 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 PDAP1Q13442 181 aaKnown RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 TAF1CQ15572 869 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 LARP1BQ659C4 914 aaKnown RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 KRT40Q6A162 431 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 HEATR3Q7Z4Q2 680 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 GTF3C2Q8WUA4 911 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-206ENST00000474648 KCNJ14Q9UNX9 436 aa11.54□□□□□ -0.56
COL8A1-206ENST00000474648 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 TLR2O60603 784 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 BCRP11274 1271 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 CRHR2Q13324 411 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 USH1GQ495M9 461 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 GPRC5AQ8NFJ5 357 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 C8orf76Q96K31 380 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 PAGR1Q9BTK6 254 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 MOV10L1Q9BXT6 1211 aaKnown RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ZFYVE28Q9HCC9 887 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 RNF186Q9NXI6 227 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 PNMA2Q9UL42 364 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 CTDP1Q9Y5B0 961 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ABCB11O95342 1321 aa11.53□□□□□ -0.56
COL8A1-206ENST00000474648 ESYT2A0FGR8 921 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 ALAS1P13196 640 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 NAPAP54920 295 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 ERVK-24P63145 666 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 TRAF1Q13077 416 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 PKP1Q13835 747 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 PLS1Q14651 629 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 TKFCQ3LXA3 575 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 MUM1L1Q5H9M0 696 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 SMCR8Q8TEV9 937 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-206ENST00000474648 TRERF1Q96PN7 1200 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 MTMR6Q9Y217 621 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 ZDHHC9Q9Y397 364 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 MRPL11Q9Y3B7 192 aaKnown RBP11.52□□□□□ -0.57
COL8A1-206ENST00000474648 KIF3AQ9Y496 699 aa11.52□□□□□ -0.57
COL8A1-206ENST00000474648 M0R2N6 131 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 MEIS2O14770 477 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 STX6O43752 255 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 SLC25A27O95847 323 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 MMP1P03956 469 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms