RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 MYH15Q9Y2K3 1946 aa11.86□□□□□ -0.51
COL12A1-206ENST00000474564 B4DLN1 442 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 ATP2A1O14983 1001 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 PTMSP20962 102 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 GJA5P36382 358 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 SNAP25P60880 206 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 HERVK_113P62684 666 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 KRT25Q7Z3Z0 450 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 DAGLBQ8NCG7 672 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 NAP1L4Q99733 375 aaKnown RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 RAVER2Q9HCJ3 691 aaKnown RBP11.85□□□□□ -0.51
COL12A1-206ENST00000474564 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
COL12A1-206ENST00000474564 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-206ENST00000474564 RASSF10A6NK89 507 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 SPDYE16A6NNV3 312 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-206ENST00000474564 DDX11L8A8MPP1 907 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
COL12A1-206ENST00000474564 DDIT3P35638 169 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 KRT85P78386 507 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 DGKZQ13574 1117 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 RILPL1Q5EBL4 403 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 NOSTRINQ8IVI9 506 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 CAPNS2Q96L46 248 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
COL12A1-206ENST00000474564 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 DTNBO60941 627 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 BMP15O95972 392 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 CFBP00751 764 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL12A1-206ENST00000474564 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-206ENST00000474564 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL12A1-206ENST00000474564 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-206ENST00000474564 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 TNPO1Q92973 898 aaKnown RBP11.83□□□□□ -0.52
COL12A1-206ENST00000474564 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 MROH8Q9H579 483 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 OTOFQ9HC10 1997 aa11.83□□□□□ -0.52
COL12A1-206ENST00000474564 TCHHQ07283 1943 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 GOLGA6L4A6NEF3 574 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 PIK3CDO00329 1044 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 MAP2K2P36507 400 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 TM4SF4P48230 202 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 TRAPPC10P48553 1259 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
COL12A1-206ENST00000474564 SLC35G1Q2M3R5 365 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 WDR78Q5VTH9 848 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 RNF207Q6ZRF8 634 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 SCAND2PQ9GZW5 306 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-206ENST00000474564 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 HOMER2Q9NSB8 354 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 RNF146Q9NTX7 359 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 PFASO15067 1338 aa11.82□□□□□ -0.52
COL12A1-206ENST00000474564 MARCH6O60337 910 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-206ENST00000474564 ZNF76P36508 570 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 MOGSQ13724 837 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 KCTD2Q14681 263 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 TMEM132BQ14DG7 1078 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 JAKMIP3Q5VZ66 844 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 NSMFQ6X4W1 530 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 PIK3AP1Q6ZUJ8 805 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 FAM43AQ8N2R8 423 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 SHCBP1Q8NEM2 672 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 GJB4Q9NTQ9 266 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 SLC5A4Q9NY91 659 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-206ENST00000474564 ADD3Q9UEY8 706 aaKnown RBP11.81□□□□□ -0.52
COL12A1-206ENST00000474564 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
COL12A1-206ENST00000474564 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 FAM155AB1AL88 458 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-206ENST00000474564 STRNO43815 780 aa11.8□□□□□ -0.52
COL12A1-206ENST00000474564 CYP2C8P10632 490 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms