RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 WWC2Q6AWC2 1192 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CHRDL2Q6WN34 429 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 APTXQ7Z2E3 356 aaKnown RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 PNMA8AQ86V59 439 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 MICU3Q86XE3 530 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 FOXP4Q8IVH2 680 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CD302Q8IX05 232 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 IFT20Q8IY31 132 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CNPY4Q8N129 248 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 NLGN1Q8N2Q7 840 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC24Q8N4L8 307 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CRACR2BQ8N4Y2 399 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 MREGQ8N565 214 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 WHAMMQ8TF30 809 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ESR2Q92731 530 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 JAKMIP2Q96AA8 810 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 PAGE5Q96GU1 130 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ZNF496Q96IT1 587 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 SH3GL2Q99962 352 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 DESI2Q9BSY9 194 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 LRRC27Q9C0I9 530 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ARIH1Q9Y4X5 557 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 CES2O00748 559 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 TRIM66O15016 1216 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 CHUKO15111 745 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PRPF3O43395 683 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 APPP05067 770 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 IL2RBP14784 551 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 SLC8A1P32418 973 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 MMP14P50281 582 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 IRAK1P51617 712 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 MNAT1P51948 309 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 TIMM10P62072 90 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 AMPD3Q01432 767 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PDE4BQ07343 736 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PAK2Q13177 524 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 KRT31Q15323 416 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 ERFEQ4G0M1 354 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC181Q5TID7 509 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 OTUD7BQ6GQQ9 843 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 KIF6Q6ZMV9 814 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 ANKRD18AQ8IVF6 992 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 OTUD6BQ8N6M0 293 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 AENQ8WTP8 325 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 ZNF622Q969S3 477 aaKnown RBP eCLIP8.94□□□□□ -0.981e-6■■■■□ 19.9
CCDC93-208ENST00000474546 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 SELENOOQ9BVL4 669 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 SH3GLB2Q9NR46 395 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 SAMSN1Q9NSI8 373 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 HYOU1Q9Y4L1 999 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 FAM169AQ9Y6X4 670 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 ATP8B3O60423 1300 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
CCDC93-208ENST00000474546 MROH5Q6ZUA9 1318 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
CCDC93-208ENST00000474546 AKAP11Q9UKA4 1901 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PIEZO1Q92508 2521 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 DDNO94850 711 aaPredicted RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 SYF2O95926 243 aaKnown RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CSF1RP07333 972 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 HNRNPH3P31942 346 aaKnown RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 UBXN1Q04323 297 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 NOGQ13253 232 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 MTMR3Q13615 1198 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 COL9A3Q14050 684 aaPredicted RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 NEDD9Q14511 834 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PPP2R5EQ16537 467 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 IFI16Q16666 785 aaKnown RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 SPDYCQ5MJ68 293 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CFAP58Q5T655 872 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 RRAGBQ5VZM2 374 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 ISM2Q6H9L7 571 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 LRIG3Q6UXM1 1119 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 KDM7AQ6ZMT4 941 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CHST3Q7LGC8 479 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CATIPQ7Z7H3 387 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 MB21D1Q8N884 522 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 FANCBQ8NB91 859 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 GIMAP7Q8NHV1 300 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 BCAS4Q8TDM0 211 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 AK8Q96MA6 479 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CLIC6Q96NY7 704 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 TRERF1Q96PN7 1200 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
CCDC93-208ENST00000474546 ISCA1Q9BUE6 129 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 CSRNP2Q9H175 543 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 STIM2Q9P246 746 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 SWAP70Q9UH65 585 aa8.93□□□□□ -0.98
CCDC93-208ENST00000474546 ANAPC4Q9UJX5 808 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms