RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 NALCNQ8IZF0 1738 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ELP1O95163 1332 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 USP32Q8NFA0 1604 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 LILRB5O75023 590 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 NEBLO76041 1014 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 RLBP1P12271 317 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 CHMLP26374 656 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ZC3H6P61129 1189 aaKnown RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 NEXNQ0ZGT2 675 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 GRIK5Q16478 980 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 NOL8Q76FK4 1167 aaKnown RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ERMP1Q7Z2K6 904 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF483Q8TF39 744 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF775Q96BV0 537 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 NECAB3Q96P71 396 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 TRIM7Q9C029 511 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ZSCAN16Q9H4T2 348 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 CCSER2Q9H7U1 834 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 COPRSQ9NQ92 184 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 ITGB1BP2Q9UKP3 347 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 BLOC1S6Q9UL45 172 aa8.34□□□□□ -1.07
GPNMB-209ENST00000474157 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.34□□□□□ -1.07
GPNMB-209ENST00000474157 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.08
GPNMB-209ENST00000474157 EIF3CLB5ME19 914 aaKnown RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 F6X3S4 739 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 IPO5O00410 1097 aaKnown RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 ENC1O14682 589 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 CELA2BP08218 269 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 FAM200BP0CF97 657 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 SKILP12757 684 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 AMPD1P23109 780 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 CDC25BP30305 580 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 ALDH1B1P30837 517 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 MNAT1P51948 309 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 RBM5P52756 815 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 SLC8A3P57103 927 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 CABP4P57796 275 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 SESN3P58005 492 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 ZKSCAN2Q63HK3 967 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 OTUD6AQ7L8S5 288 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 TEKT1Q969V4 418 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 EIF3CQ99613 913 aaKnown RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 BAG1Q99933 345 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 KBTBD4Q9NVX7 518 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 MARF1Q9Y4F3 1742 aaKnown RBP8.33□□□□□ -1.08
GPNMB-209ENST00000474157 ARHGEF10O15013 1369 aa8.33□□□□□ -1.08
GPNMB-209ENST00000474157 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 TNS3Q68CZ2 1445 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 GOLGA6L10A6NI86 522 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 PDLIM1O00151 329 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 B3GALT4O96024 378 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 NF2P35240 595 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 DEUP1Q05D60 604 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 IKBKEQ14164 716 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 TBC1D25Q3MII6 688 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC178Q5BJE1 867 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 TAX1BP1Q86VP1 789 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 ANKRD13BQ86YJ7 626 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 BICD2Q8TD16 824 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 SMCR8Q8TEV9 937 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 CCDC34Q96HJ3 373 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 ARPC5LQ9BPX5 153 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 SLX1AQ9BQ83 275 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 UBXN6Q9BZV1 441 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 PDGFDQ9GZP0 370 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 MAGEC2Q9UBF1 373 aaPredicted RBP8.32□□□□□ -1.08
GPNMB-209ENST00000474157 MYO6Q9UM54 1294 aa8.32□□□□□ -1.08
GPNMB-209ENST00000474157 PTPRCP08575 1304 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 SPATA31A1Q5TZJ5 1347 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 H3BRJ5 948 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 CHUKO15111 745 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 PLSCR1O15162 318 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 PAGE1O75459 146 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 FAM163BP0C2L3 166 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 VCAM1P19320 739 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 PRELPP51888 382 aa8.31□□□□□ -1.08
GPNMB-209ENST00000474157 TBC1D10BQ4KMP7 808 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 ACBD5Q5T8D3 534 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-209ENST00000474157 HHATQ5VTY9 493 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms