RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 RRP12Q5JTH9 1297 aaKnown RBP29.27■■■□□ 2.28
PKD1-211ENST00000474088 TTBK2Q6IQ55 1244 aa29.27■■■□□ 2.28
PKD1-211ENST00000474088 NOL8Q76FK4 1167 aaKnown RBP29.27■■■□□ 2.28
PKD1-211ENST00000474088 CDX2Q99626 313 aaPredicted RBP29.27■■■□□ 2.28
PKD1-211ENST00000474088 TCP11L1Q9NUJ3 509 aa29.27■■■□□ 2.28
PKD1-211ENST00000474088 CCPG1Q9ULG6 757 aa29.27■■■□□ 2.28
PKD1-211ENST00000474088 GNEQ9Y223 722 aaKnown RBP29.27■■■□□ 2.28
PKD1-211ENST00000474088 ASTN1O14525 1302 aa29.26■■■□□ 2.27
PKD1-211ENST00000474088 ICAM1P05362 532 aa29.26■■■□□ 2.27
PKD1-211ENST00000474088 BTNL9Q6UXG8 535 aa29.26■■■□□ 2.27
PKD1-211ENST00000474088 TMEM47Q9BQJ4 181 aa29.26■■■□□ 2.27
PKD1-211ENST00000474088 RANBP17Q9H2T7 1088 aaKnown RBP29.26■■■□□ 2.27
PKD1-211ENST00000474088 TOP1P11387 765 aaKnown RBP29.25■■■□□ 2.27
PKD1-211ENST00000474088 SLC16A2P36021 539 aa29.25■■■□□ 2.27
PKD1-211ENST00000474088 BEX3Q00994 111 aa29.25■■■□□ 2.27
PKD1-211ENST00000474088 NMIQ13287 307 aaPredicted RBP29.25■■■□□ 2.27
PKD1-211ENST00000474088 MFSD5Q6N075 450 aa29.25■■■□□ 2.27
PKD1-211ENST00000474088 NSMFQ6X4W1 530 aa29.25■■■□□ 2.27
PKD1-211ENST00000474088 LNPKQ9C0E8 428 aa29.25■■■□□ 2.27
PKD1-211ENST00000474088 TTYH1Q9H313 450 aaPredicted RBP29.25■■■□□ 2.27
PKD1-211ENST00000474088 DDX49Q9Y6V7 483 aaKnown RBP29.25■■■□□ 2.27
PKD1-211ENST00000474088 TRIM6-TRIM34B2RNG4 842 aa29.24■■■□□ 2.27
PKD1-211ENST00000474088 ZNF589Q86UQ0 364 aaPredicted RBP29.24■■■□□ 2.27
PKD1-211ENST00000474088 ZMYM6O95789 1325 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 SMPD1P17405 629 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 IQSEC1Q6DN90 963 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 TAPT1Q6NXT6 567 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 TLK2Q86UE8 772 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 FAM126BQ8IXS8 530 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 PURBQ96QR8 312 aaKnown RBP29.23■■■□□ 2.27
PKD1-211ENST00000474088 PDGFCQ9NRA1 345 aa29.23■■■□□ 2.27
PKD1-211ENST00000474088 TLR3O15455 904 aaKnown RBP29.22■■■□□ 2.27
PKD1-211ENST00000474088 HAND2P61296 217 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 AAMPQ13685 434 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 SYDE2Q5VT97 1194 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 EEPD1Q7L9B9 569 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 RILPL2Q969X0 211 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 AP5M1Q9H0R1 490 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 GPCPD1Q9NPB8 672 aa29.22■■■□□ 2.27
PKD1-211ENST00000474088 FRMPD2Q68DX3 1309 aaPredicted RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 CCDC171Q6TFL3 1326 aa29.21■■■□□ 2.27
PKD1-211ENST00000474088 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 DYNC1LI2O43237 492 aaPredicted RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 BAATQ14032 418 aaPredicted RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 FSCN1Q16658 493 aaKnown RBP29.21■■■□□ 2.27
PKD1-211ENST00000474088 CXCL17Q6UXB2 119 aa29.21■■■□□ 2.27
PKD1-211ENST00000474088 MORC4Q8TE76 937 aa29.21■■■□□ 2.27
PKD1-211ENST00000474088 TTC14Q96N46 770 aa29.21■■■□□ 2.27
PKD1-211ENST00000474088 Q9Y3F1 56 aa29.21■■■□□ 2.27
PKD1-211ENST00000474088 CABYRO75952 493 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 PPIGQ13427 754 aaKnown RBP eCLIP29.2■■■□□ 2.263e-6■□□□□ 9.8
PKD1-211ENST00000474088 AKNAD1Q5T1N1 836 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 MFSD6Q6ZSS7 791 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.2■■■□□ 2.26
PKD1-211ENST00000474088 FBXO16Q8IX29 292 aaPredicted RBP29.2■■■□□ 2.26
PKD1-211ENST00000474088 SMC5Q8IY18 1101 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 SLC43A3Q8NBI5 491 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.2■■■□□ 2.264e-10■□□□□ 10.5
PKD1-211ENST00000474088 VTA1Q9NP79 307 aa29.2■■■□□ 2.26
PKD1-211ENST00000474088 TMEM265A0A087WTH1 108 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 CD4P01730 458 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 PDHBP11177 359 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 PCP11498 1178 aaKnown RBP29.19■■■□□ 2.26
PKD1-211ENST00000474088 PTGS1P23219 599 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 B4GALNT3Q6L9W6 998 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 C16orf59Q7L2K0 433 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 TMEM199Q8N511 208 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 MYLIPQ8WY64 445 aa29.19■■■□□ 2.26
PKD1-211ENST00000474088 RWDD1Q9H446 243 aaPredicted RBP29.19■■■□□ 2.26
PKD1-211ENST00000474088 ZEB2O60315 1214 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 CSF2RAP15509 400 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 SDSP20132 328 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 TMEM63BQ5T3F8 832 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 KIAA1211Q6ZU35 1233 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 PPP1R12CQ9BZL4 782 aa29.18■■■□□ 2.26
PKD1-211ENST00000474088 ADD3Q9UEY8 706 aaKnown RBP29.18■■■□□ 2.26
PKD1-211ENST00000474088 NFIBO00712 420 aa29.17■■■□□ 2.26
PKD1-211ENST00000474088 MFAP1P55081 439 aaKnown RBP29.17■■■□□ 2.26
PKD1-211ENST00000474088 ITGA7Q13683 1181 aa29.17■■■□□ 2.26
PKD1-211ENST00000474088 TMEM240Q5SV17 173 aa29.17■■■□□ 2.26
PKD1-211ENST00000474088 LRRC37A2A6NM11 1700 aa29.17■■■□□ 2.26
PKD1-211ENST00000474088 ALDH5A1P51649 535 aaPredicted RBP29.16■■■□□ 2.26
PKD1-211ENST00000474088 ZNF543Q08ER8 600 aa29.16■■■□□ 2.26
PKD1-211ENST00000474088 TBC1D10CQ8IV04 446 aa29.16■■■□□ 2.26
PKD1-211ENST00000474088 SEZ6LQ9BYH1 1024 aa29.16■■■□□ 2.26
PKD1-211ENST00000474088 RNF41Q9H4P4 317 aaPredicted RBP29.16■■■□□ 2.26
PKD1-211ENST00000474088 PNMA2Q9UL42 364 aa29.16■■■□□ 2.26
PKD1-211ENST00000474088 GRIN2DO15399 1336 aa29.16■■■□□ 2.26
PKD1-211ENST00000474088 LOC102724159A0A0B4J2E5 919 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 PTPDC1A2A3K4 754 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 SNHG28P0DPA3 235 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 PWP2Q15269 919 aaKnown RBP29.15■■■□□ 2.26
PKD1-211ENST00000474088 CHD1LQ86WJ1 897 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 PLEKHM2Q8IWE5 1019 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 MAFAQ8NHW3 353 aaPredicted RBP29.15■■■□□ 2.26
PKD1-211ENST00000474088 CLEC4DQ8WXI8 215 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 OSBPL3Q9H4L5 887 aa29.15■■■□□ 2.26
PKD1-211ENST00000474088 LAMA2P24043 3122 aaKnown RBP29.14■■■□□ 2.26
PKD1-211ENST00000474088 LCTP09848 1927 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms